Difference between revisions of "AMACETOXID-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLCHOLINESTERASE-RXN ACETYLCHOLINESTERASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPKIN-RXN UDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** nucleoside_diphosp...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLCHOLINESTERASE-RXN ACETYLCHOLINESTERASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPKIN-RXN UDPKIN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** para-nitrobenzyl_esterase
+
** ORF
 +
** nucleoside_diphosphate_kinase
 +
** adenylate_kinase_domain-containing_protein_1
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.1.7 EC-3.1.1.7]
+
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[ACETYLCHOLINE]][c] '''=>''' 1 [[ACET]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CHOLINE]][c]
+
** 1 [[UDP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[UTP]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 acetylcholine[c] '''=>''' 1 acetate[c] '''+''' 1 H+[c] '''+''' 1 choline[c]
+
** 1 UDP[c] '''+''' 1 ATP[c] '''=>''' 1 UTP[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_4650]]
+
* Gene: [[Tiso_gene_16529]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_18224]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17272]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_9290]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_195]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17271]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7176]], UTP and CTP de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7176 PWY-7176]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17561 17561]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25098 25098]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01026 R01026]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00156 R00156]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/Q7LZJ6 Q7LZJ6]
+
−
** [http://www.uniprot.org/uniprot/P07140 P07140]
+
−
** [http://www.uniprot.org/uniprot/P07692 P07692]
+
−
** [http://www.uniprot.org/uniprot/Q7LZG1 Q7LZG1]
+
−
** [http://www.uniprot.org/uniprot/P22303 P22303]
+
−
** [http://www.uniprot.org/uniprot/Q7LZ27 Q7LZ27]
+
−
** [http://www.uniprot.org/uniprot/P38433 P38433]
+
−
** [http://www.uniprot.org/uniprot/P04058 P04058]
+
−
** [http://www.uniprot.org/uniprot/Q95WV7 Q95WV7]
+
−
** [http://www.uniprot.org/uniprot/Q95P20 Q95P20]
+
−
** [http://www.uniprot.org/uniprot/Q8MXC9 Q8MXC9]
+
−
** [http://www.uniprot.org/uniprot/Q8MXC8 Q8MXC8]
+
−
** [http://www.uniprot.org/uniprot/Q8MXC7 Q8MXC7]
+
−
** [http://www.uniprot.org/uniprot/Q8MXC6 Q8MXC6]
+
−
** [http://www.uniprot.org/uniprot/Q8MXC5 Q8MXC5]
+
−
** [http://www.uniprot.org/uniprot/Q8MXC4 Q8MXC4]
+
−
** [http://www.uniprot.org/uniprot/P21836 P21836]
+
−
** [http://www.uniprot.org/uniprot/P37136 P37136]
+
−
** [http://www.uniprot.org/uniprot/Q03637 Q03637]
+
−
** [http://www.uniprot.org/uniprot/Q9PWR0 Q9PWR0]
+
−
** [http://www.uniprot.org/uniprot/P36196 P36196]
+
−
** [http://www.uniprot.org/uniprot/Q7M382 Q7M382]
+
−
** [http://www.uniprot.org/uniprot/Q9TX11 Q9TX11]
+
−
** [http://www.uniprot.org/uniprot/Q7M2N6 Q7M2N6]
+
−
** [http://www.uniprot.org/uniprot/Q9TR27 Q9TR27]
+
−
** [http://www.uniprot.org/uniprot/O61372 O61372]
+
−
** [http://www.uniprot.org/uniprot/O61371 O61371]
+
−
** [http://www.uniprot.org/uniprot/O61459 O61459]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=para-nitrobenzyl_esterase}}
+
{{#set: common name=ORF}}
−
{{#set: ec number=EC-3.1.1.7}}
+
{{#set: common name=nucleoside_diphosphate_kinase}}
−
{{#set: gene associated=Tiso_gene_4650}}
+
{{#set: common name=adenylate_kinase_domain-containing_protein_1}}
−
{{#set: in pathway=}}
+
{{#set: ec number=EC-2.7.4.6}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: gene associated=Tiso_gene_16529|Tiso_gene_18224|Tiso_gene_17272|Tiso_gene_9290|Tiso_gene_195|Tiso_gene_17271}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: in pathway=PWY-7176}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:09, 21 March 2018

Reaction UDPKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • nucleoside_diphosphate_kinase
    • adenylate_kinase_domain-containing_protein_1
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UDP[c] + 1 ATP[c] => 1 UTP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7176, UTP and CTP de novo biosynthesis: PWY-7176
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links






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