Difference between revisions of "GABATRANSAM-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16602 RXN-16602] == * direction: ** LEFT-TO-RIGHT * common name: ** dolichol_phosphate_mannose...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAG1P-URIDYLTRANS-RXN NAG1P-URIDYLTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dp-...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16602 RXN-16602] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAG1P-URIDYLTRANS-RXN NAG1P-URIDYLTRANS-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** dolichol_phosphate_mannose
+
** dp-n-acetylglucosamine_pyrophosphorylase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.1.83 EC-2.4.1.83]
+
** [http://enzyme.expasy.org/EC/2.7.7.23 EC-2.7.7.23]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-17858]][c] '''+''' 1 [[GDP-MANNOSE]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[CPD-17894]][c]
+
** 1 [[N-ACETYL-D-GLUCOSAMINE-1-P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UTP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ω-saturated C55 dolichol phosphate[c] '''+''' 1 GDP-α-D-mannose[c] '''=>''' 1 GDP[c] '''+''' 1 β-D-mannosyl-(C55 ω-saturated dolichyl phosphate)[c]
+
** 1 N-acetyl-α-D-glucosamine 1-phosphate[c] '''+''' 1 H+[c] '''+''' 1 UTP[c] '''=>''' 1 diphosphate[c] '''+''' 1 UDP-N-acetyl-α-D-glucosamine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_16772]]
+
* Gene: [[Tiso_gene_6457]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_19372]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_6459]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6458]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7661]], protein N-glycosylation (Haloferax volcanii): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7661 PWY-7661]
+
* [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5514 PWY-5514]
−
** '''1''' reactions found over '''10''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[UDPNACETYLGALSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLGALSYN-PWY UDPNACETYLGALSYN-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-1261]], anhydromuropeptides recycling: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1261 PWY0-1261]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[UDPNAGSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=UDPNAGSYN-PWY UDPNAGSYN-PWY]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13509 13509]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00416 R00416]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9PPA2 Q9PPA2]
 +
** [http://www.uniprot.org/uniprot/Q9JWN3 Q9JWN3]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=dolichol_phosphate_mannose}}
+
{{#set: common name=dp-n-acetylglucosamine_pyrophosphorylase}}
−
{{#set: ec number=EC-2.4.1.83}}
+
{{#set: ec number=EC-2.7.7.23}}
−
{{#set: gene associated=Tiso_gene_16772}}
+
{{#set: gene associated=Tiso_gene_6457|Tiso_gene_19372|Tiso_gene_6459|Tiso_gene_6458}}
−
{{#set: in pathway=PWY-7661}}
+
{{#set: in pathway=PWY-5514|UDPNACETYLGALSYN-PWY|PWY0-1261|UDPNAGSYN-PWY}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:09, 21 March 2018

Reaction NAG1P-URIDYLTRANS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dp-n-acetylglucosamine_pyrophosphorylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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