Difference between revisions of "Annotation"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NTPD NTPD] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside-triphosphate diphosphatase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17855 RXN-17855] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NTPD NTPD] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17855 RXN-17855] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
+
* ec number:
** nucleoside-triphosphate diphosphatase (XTP)
+
** [http://enzyme.expasy.org/EC/2.3.1.bv EC-2.3.1.bv]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[XTP]][c] '''+''' 1.0 [[WATER]][c] '''=>''' 1.0 [[XANTHOSINE-5-PHOSPHATE]][c] '''+''' 1.0 [[PPI]][c] '''+''' 1.0 [[PROTON]][c]
+
** 1 [[ACETYL-COA]][c] '''+''' 1 [[L-methionyl-L-isoleucyl-Protein]][c] '''=>''' 1 [[N-Ac-L-methionyl-L-isoleucyl-Protein]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 XTP[c] '''+''' 1.0 H2O[c] '''=>''' 1.0 XMP[c] '''+''' 1.0 diphosphate[c] '''+''' 1.0 H+[c]
+
** 1 acetyl-CoA[c] '''+''' 1 an N-terminal-L-methionyl-L-isoleucyl-[protein][c] '''=>''' 1 an N-terminal Nα-acetyl-L-methionyl-L-isoleucyl-[protein][c] '''+''' 1 H+[c] '''+''' 1 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Tiso_gene_18793]]
 
** [[pantograph]]-[[creinhardtii]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
+
* Category: [[annotation]]
** Source: [[orthology-creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=nucleoside-triphosphate diphosphatase (XTP)}}
+
{{#set: ec number=EC-2.3.1.bv}}
{{#set: gene associated=Tiso_gene_18793}}
+
{{#set: in pathway=PWY-7800}}
{{#set: in pathway=}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
{{#set: reconstruction source=orthology-creinhardtii}}
+
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction tool=pantograph}}
+

Revision as of 16:09, 21 March 2018

Reaction RXN-17855

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7800, Ac/N-end rule pathway: PWY-7800
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links