Difference between revisions of "Manual-primary network"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.25-RXN 3.2.1.25-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** mannosidase * ec numb...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDP-GLUCURONATE-4-EPIMERASE-RXN UDP-GLUCURONATE-4-EPIMERASE-RXN] == * direction: ** REVERSIBLE * ec...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.25-RXN 3.2.1.25-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDP-GLUCURONATE-4-EPIMERASE-RXN UDP-GLUCURONATE-4-EPIMERASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** mannosidase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.1.25 EC-3.2.1.25]
+
** [http://enzyme.expasy.org/EC/5.1.3.6 EC-5.1.3.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Beta-D-Mannosides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-12601]][c] '''+''' 1 [[Non-Glycosylated-sugar-Acceptors]][c]
+
** 1 [[UDP-GLUCURONATE]][c] '''<=>''' 1 [[UDP-D-GALACTURONATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a &beta;-D-mannoside[c] '''+''' 1 H2O[c] '''=>''' 1 &beta;-D-mannopyranose[c] '''+''' 1 a non glycosylated sugar acceptor[c]
+
** 1 UDP-&alpha;-D-glucuronate[c] '''<=>''' 1 UDP-&alpha;-D-galacturonate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_634]]
+
* Gene: [[Tiso_gene_12322]]
−
** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-4861]], UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4861 PWY-4861]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6415]], L-ascorbate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6415 PWY-6415]
 +
** '''2''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-creinhardtii]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/Q29444 Q29444]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11407 11407]
−
** [http://www.uniprot.org/uniprot/P55278 P55278]
+
* LIGAND-RXN:
−
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01385 R01385]
−
{{#set: common name=mannosidase}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-3.2.1.25}}
+
{{#set: ec number=EC-5.1.3.6}}
−
{{#set: gene associated=Tiso_gene_634}}
+
{{#set: gene associated=Tiso_gene_12322}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-4861|PWY-6415}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}

Revision as of 16:09, 21 March 2018

Reaction UDP-GLUCURONATE-4-EPIMERASE-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4861, UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate): PWY-4861
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6415, L-ascorbate biosynthesis V: PWY-6415
    • 2 reactions found over 11 reactions in the full pathway

Reconstruction information

External links




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