Difference between revisions of "PWY-5151"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12398 RXN-12398] == * direction: ** LEFT-TO-RIGHT * common name: ** xyloglucan XXLG oligosaccha...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5151 PWY-5151] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12398 RXN-12398] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5151 PWY-5151] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
 
* common name:
 
* common name:
** xyloglucan XXLG oligosaccharide β-galactosidase
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** L-tyrosine degradation II
** glycoside_hydrolase
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** polyprotein
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''1''' reactions found over '''2''' reactions in the full pathway
** 1 [[CPD-13376]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13375]][c] '''+''' 1 [[D-galactopyranose]][c]
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* [[TYROSINE-AMINOTRANSFERASE-RXN]]
* With common name(s):
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** 3 associated gene(s):
** 1 XXLG xyloglucan oligosaccharide[c] '''+''' 1 H2O[c] '''=>''' 1 XXXG xyloglucan oligosaccharide[c] '''+''' 1 D-galactopyranose[c]
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*** [[Tiso_gene_10680]]
 
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*** [[Tiso_gene_6815]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_17718]]
Genes have been associated with this reaction based on different elements listed below.
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** 3 reconstruction source(s) associated:
* Gene: [[Tiso_gene_12839]]
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*** [[manual-primary_network]]
** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-creinhardtii]]
*** Assignment: EC-NUMBER
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*** [[orthology-synechocystis]]
* Gene: [[Tiso_gene_1398]]
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== Reaction(s) not found ==
** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.3.13-RXN 1.2.3.13-RXN]
*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_17558]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6807]], xyloglucan degradation II (exoglucanase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6807 PWY-6807]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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* UM-BBD-PWY : tyr
{{#set: common name=xyloglucan XXLG oligosaccharide β-galactosidase}}
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{{#set: taxonomic range=TAX-1239}}
{{#set: common name=glycoside_hydrolase}}
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{{#set: taxonomic range=TAX-201174}}
{{#set: common name=polyprotein}}
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{{#set: common name=L-tyrosine degradation II}}
{{#set: ec number=EC-3.2.1.23}}
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{{#set: reaction found=1}}
{{#set: gene associated=Tiso_gene_12839|Tiso_gene_1398|Tiso_gene_17558}}
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{{#set: total reaction=2}}
{{#set: in pathway=PWY-6807}}
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{{#set: completion rate=50.0}}
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:05, 21 March 2018

Pathway PWY-5151

Reaction(s) found

1 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links

  • UM-BBD-PWY : tyr