Difference between revisions of "Tiso gene 7315"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] == * direction: ** LEFT-...")
(Created page with "Category:Gene == Gene Tiso_gene_7315 == * right end position: ** 8200 * transcription direction: ** POSITIVE * left end position: ** 5084 * centisome position: ** 44.99115...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] ==
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== Gene Tiso_gene_7315 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 8200
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* common name:
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* transcription direction:
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** cryptochrome_photolyase_fad-binding_domain-containing_protein
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/4.1.99.3 EC-4.1.99.3]
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** 5084
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* centisome position:
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** 44.99115   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
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** 1 [[DNA-With-Pyrimidine-Dimers]][c] '''=>''' 1 [[DNA-Adjacent-Pyrimidines]][c]
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* With common name(s):
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**
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_15524]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_6546]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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* Gene: [[Tiso_gene_6547]]
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== Pathways associated ==
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_15525]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_16321]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_15196]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_6548]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=8200}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00034 R00034]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: left end position=5084}}
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** [http://www.uniprot.org/uniprot/P12769 P12769]
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{{#set: centisome position=44.99115    }}
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** [http://www.uniprot.org/uniprot/Q9JSP8 Q9JSP8]
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{{#set: reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9HQ46 Q9HQ46]
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** [http://www.uniprot.org/uniprot/P12768 P12768]
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** [http://www.uniprot.org/uniprot/P27526 P27526]
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** [http://www.uniprot.org/uniprot/P25078 P25078]
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** [http://www.uniprot.org/uniprot/Q43125 Q43125]
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** [http://www.uniprot.org/uniprot/P40115 P40115]
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** [http://www.uniprot.org/uniprot/Q28811 Q28811]
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** [http://www.uniprot.org/uniprot/Q24443 Q24443]
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** [http://www.uniprot.org/uniprot/Q91186 Q91186]
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** [http://www.uniprot.org/uniprot/Q42696 Q42696]
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** [http://www.uniprot.org/uniprot/P05066 P05066]
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** [http://www.uniprot.org/uniprot/O24020 O24020]
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** [http://www.uniprot.org/uniprot/O24374 O24374]
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** [http://www.uniprot.org/uniprot/P00914 P00914]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=cryptochrome_photolyase_fad-binding_domain-containing_protein}}
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{{#set: ec number=EC-4.1.99.3}}
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{{#set: gene associated=Tiso_gene_15524|Tiso_gene_6546|Tiso_gene_6547|Tiso_gene_15525|Tiso_gene_16321|Tiso_gene_15196|Tiso_gene_6548}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:09, 21 March 2018

Gene Tiso_gene_7315

  • right end position:
    • 8200
  • transcription direction:
    • POSITIVE
  • left end position:
    • 5084
  • centisome position:
    • 44.99115
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7315&oldid=39829"