Difference between revisions of "Tiso gene 15043"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-3...")
(Created page with "Category:Gene == Gene Tiso_gene_15043 == * right end position: ** 4142 * transcription direction: ** POSITIVE * left end position: ** 1351 * centisome position: ** 25.6259...")
 
Line 1: Line 1:
[[Category:Pathway]]
+
[[Category:Gene]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994] ==
+
== Gene Tiso_gene_15043 ==
* taxonomic range:
+
* right end position:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
+
** 4142
* common name:
+
* transcription direction:
** palmitate biosynthesis I (animals and fungi)
+
** POSITIVE
 +
* left end position:
 +
** 1351
 +
* centisome position:
 +
** 25.625948   
 
* Synonym(s):
 
* Synonym(s):
** palmitic acid biosynthesis
 
** de novo lipogenesis
 
  
== Reaction(s) found ==
+
== Reactions associated ==
'''31''' reactions found over '''31''' reactions in the full pathway
+
* Reaction: [[ATPASE-RXN]]
* [[3.1.2.21-RXN]]
+
** Source: [[annotation-in-silico_annotation]]
** 0 associated gene:
+
*** Assignment: ec-number
** 1 reconstruction source(s) associated:
+
* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
** Source: [[annotation-in-silico_annotation]]
* [[4.2.1.58-RXN]]
+
*** Assignment: ec-number
** 6 associated gene(s):
+
* Reaction: [[RXN-12195]]
*** [[Tiso_gene_13394]]
+
** Source: [[annotation-in-silico_annotation]]
*** [[Tiso_gene_6884]]
+
*** Assignment: ec-number
*** [[Tiso_gene_136]]
+
* Reaction: [[RXN-12196]]
*** [[Tiso_gene_10876]]
+
** Source: [[annotation-in-silico_annotation]]
*** [[Tiso_gene_500]]
+
*** Assignment: ec-number
*** [[Tiso_gene_135]]
+
* Reaction: [[RXN0-5462]]
** 3 reconstruction source(s) associated:
+
** Source: [[annotation-in-silico_annotation]]
*** [[annotation-experimental_annotation]]
+
*** Assignment: ec-number
*** [[manual-primary_network]]
+
== Pathways associated ==
*** [[annotation-in-silico_annotation]]
+
* [[PWY-7184]]
* [[4.2.1.59-RXN]]
+
* [[PWY-7198]]
** 7 associated gene(s):
+
* [[PWY-6545]]
*** [[Tiso_gene_136]]
+
* [[PWY-7210]]
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_6885]]
+
*** [[Tiso_gene_6884]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_13394]]
+
** 4 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
*** [[manual-primary_network]]
+
*** [[annotation-experimental_annotation]]
+
*** [[orthology-synechocystis]]
+
* [[4.2.1.61-RXN]]
+
** 6 associated gene(s):
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_6884]]
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_10876]]
+
** 3 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
*** [[manual-primary_network]]
+
*** [[annotation-experimental_annotation]]
+
* [[PALMITOYL-COA-HYDROLASE-RXN]]
+
** 1 associated gene(s):
+
*** [[Tiso_gene_801]]
+
** 2 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-creinhardtii]]
+
* [[RXN-9514]]
+
** 10 associated gene(s):
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_16579]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_13083]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_9885]]
+
*** [[Tiso_gene_10415]]
+
*** [[Tiso_gene_624]]
+
** 5 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[manual-primary_network]]
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-synechocystis]]
+
*** [[orthology-esiliculosus]]
+
* [[RXN-9515]]
+
** 5 associated gene(s):
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_500]]
+
** 3 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[manual-primary_network]]
+
*** [[annotation-in-silico_annotation]]
+
* [[RXN-9518]]
+
** 7 associated gene(s):
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_9885]]
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_13083]]
+
** 4 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
*** [[manual-primary_network]]
+
*** [[annotation-experimental_annotation]]
+
*** [[orthology-esiliculosus]]
+
* [[RXN-9520]]
+
** 6 associated gene(s):
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_6884]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_136]]
+
** 3 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
*** [[manual-primary_network]]
+
*** [[annotation-experimental_annotation]]
+
* [[RXN-9521]]
+
** 5 associated gene(s):
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_13394]]
+
** 2 reconstruction source(s) associated:
+
*** [[manual-primary_network]]
+
*** [[annotation-in-silico_annotation]]
+
* [[RXN-9524]]
+
** 10 associated gene(s):
+
*** [[Tiso_gene_13083]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_9885]]
+
*** [[Tiso_gene_624]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_10415]]
+
*** [[Tiso_gene_16579]]
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_13394]]
+
** 5 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[manual-primary_network]]
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-synechocystis]]
+
*** [[orthology-esiliculosus]]
+
* [[RXN-9526]]
+
** 5 associated gene(s):
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_13394]]
+
** 2 reconstruction source(s) associated:
+
*** [[manual-primary_network]]
+
*** [[annotation-in-silico_annotation]]
+
* [[RXN-9528]]
+
** 10 associated gene(s):
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_13083]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_624]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_16579]]
+
*** [[Tiso_gene_10415]]
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_9885]]
+
** 5 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
*** [[manual-primary_network]]
+
*** [[annotation-experimental_annotation]]
+
*** [[orthology-synechocystis]]
+
*** [[orthology-esiliculosus]]
+
* [[RXN-9530]]
+
** 5 associated gene(s):
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_500]]
+
** 2 reconstruction source(s) associated:
+
*** [[manual-primary_network]]
+
*** [[annotation-in-silico_annotation]]
+
* [[RXN-9532]]
+
** 7 associated gene(s):
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_9885]]
+
*** [[Tiso_gene_13083]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_135]]
+
** 4 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
*** [[manual-primary_network]]
+
*** [[annotation-experimental_annotation]]
+
*** [[orthology-esiliculosus]]
+
* [[RXN-9533]]
+
** 6 associated gene(s):
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_6884]]
+
** 3 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
*** [[manual-primary_network]]
+
*** [[annotation-experimental_annotation]]
+
* [[RXN-9534]]
+
** 6 associated gene(s):
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_10778]]
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_13394]]
+
** 3 reconstruction source(s) associated:
+
*** [[manual-primary_network]]
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-synechocystis]]
+
* [[RXN-9536]]
+
** 10 associated gene(s):
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_9885]]
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_10415]]
+
*** [[Tiso_gene_13083]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_624]]
+
*** [[Tiso_gene_16579]]
+
** 5 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[manual-primary_network]]
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-synechocystis]]
+
*** [[orthology-esiliculosus]]
+
* [[RXN-9537]]
+
** 9 associated gene(s):
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_6884]]
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_9421]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_6885]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_6671]]
+
** 5 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[manual-primary_network]]
+
*** [[orthology-creinhardtii]]
+
*** [[orthology-synechocystis]]
+
*** [[annotation-in-silico_annotation]]
+
* [[RXN-9538]]
+
** 6 associated gene(s):
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_10778]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_500]]
+
** 3 reconstruction source(s) associated:
+
*** [[manual-primary_network]]
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-synechocystis]]
+
* [[RXN-9540]]
+
** 7 associated gene(s):
+
*** [[Tiso_gene_9885]]
+
*** [[Tiso_gene_13083]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_500]]
+
** 4 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
*** [[manual-primary_network]]
+
*** [[annotation-experimental_annotation]]
+
*** [[orthology-esiliculosus]]
+
* [[RXN-9542]]
+
** 6 associated gene(s):
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_10778]]
+
** 2 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-synechocystis]]
+
* [[RXN-9549]]
+
** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
* [[RXN-9648]]
+
** 9 associated gene(s):
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_19302]]
+
*** [[Tiso_gene_14485]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_5939]]
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_15991]]
+
*** [[Tiso_gene_136]]
+
** 3 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
*** [[annotation-experimental_annotation]]
+
*** [[orthology-esiliculosus]]
+
* [[RXN-9650]]
+
** 9 associated gene(s):
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_14485]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_19302]]
+
*** [[Tiso_gene_15991]]
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_5939]]
+
** 3 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
*** [[annotation-experimental_annotation]]
+
*** [[orthology-esiliculosus]]
+
* [[RXN-9651]]
+
** 9 associated gene(s):
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_14485]]
+
*** [[Tiso_gene_19302]]
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_15991]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_5939]]
+
** 3 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-esiliculosus]]
+
* [[RXN-9652]]
+
** 9 associated gene(s):
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_15991]]
+
*** [[Tiso_gene_14485]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_19302]]
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_5939]]
+
** 3 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-esiliculosus]]
+
* [[RXN-9653]]
+
** 9 associated gene(s):
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_5939]]
+
*** [[Tiso_gene_15991]]
+
*** [[Tiso_gene_19302]]
+
*** [[Tiso_gene_14485]]
+
*** [[Tiso_gene_136]]
+
** 3 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-esiliculosus]]
+
* [[RXN-9654]]
+
** 9 associated gene(s):
+
*** [[Tiso_gene_15991]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_19302]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_14485]]
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_5939]]
+
** 3 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
*** [[annotation-experimental_annotation]]
+
*** [[orthology-esiliculosus]]
+
* [[RXN-9655]]
+
** 6 associated gene(s):
+
*** [[Tiso_gene_10876]]
+
*** [[Tiso_gene_136]]
+
*** [[Tiso_gene_500]]
+
*** [[Tiso_gene_13394]]
+
*** [[Tiso_gene_135]]
+
*** [[Tiso_gene_6884]]
+
** 3 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
*** [[manual-primary_network]]
+
*** [[annotation-experimental_annotation]]
+
* [[RXN3O-9780]]
+
** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
== Reaction(s) not found ==
+
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-33154}}
+
{{#set: right end position=4142}}
{{#set: common name=palmitate biosynthesis I (animals and fungi)}}
+
{{#set: transcription direction=POSITIVE}}
{{#set: common name=palmitic acid biosynthesis|de novo lipogenesis}}
+
{{#set: left end position=1351}}
{{#set: reaction found=31}}
+
{{#set: centisome position=25.625948    }}
{{#set: total reaction=31}}
+
{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
{{#set: completion rate=100.0}}
+
{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}

Latest revision as of 20:11, 21 March 2018

Gene Tiso_gene_15043

  • right end position:
    • 4142
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1351
  • centisome position:
    • 25.625948
  • Synonym(s):

Reactions associated

Pathways associated

External links