Difference between revisions of "PWY3O-355"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12093 RXN-12093] == * direction: ** LEFT-TO-RIGHT * common name: ** 7-cyano-7-deazaguanine_synt...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12093 RXN-12093] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* common name:
 
* common name:
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** 7-cyano-7-deazaguanine_synthase
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** stearate biosynthesis III (fungi)
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* ec number:
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** [http://enzyme.expasy.org/EC/6.3.4.20 EC-6.3.4.20]
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* Synonym(s):
 
* Synonym(s):
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** fatty acid biosynthesis
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** stearic acid biosynthesis
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** octadecanoate biosynthesis
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** saturated fatty acid biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''6''' reactions found over '''6''' reactions in the full pathway
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** 1 [[ATP]][c] '''+''' 1 [[CPD-13043]][c] '''+''' 1 [[AMMONIUM]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[7-CYANO-7-DEAZAGUANINE]][c]
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* [[RXN-9624]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 ATP[c] '''+''' 1 7-carboxy-7-deazaguanine[c] '''+''' 1 ammonium[c] '''=>''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 H2O[c] '''+''' 1 preQ0[c]
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*** [[Tiso_gene_7477]]
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*** [[Tiso_gene_801]]
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== Genes associated with this reaction  ==
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** 3 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_10965]]
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*** [[orthology-athaliana]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-creinhardtii]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[RXN-9633]]
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== Pathways  ==
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** 7 associated gene(s):
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* [[PWY-6703]], preQ0 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6703 PWY-6703]
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*** [[Tiso_gene_10876]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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*** [[Tiso_gene_9885]]
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== Reconstruction information  ==
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*** [[Tiso_gene_136]]
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* Category: [[annotation]]
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*** [[Tiso_gene_135]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_500]]
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*** Tool: [[pathwaytools]]
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*** [[Tiso_gene_13394]]
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*** [[Tiso_gene_13083]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-9634]]
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** 6 associated gene(s):
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*** [[Tiso_gene_10876]]
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*** [[Tiso_gene_500]]
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*** [[Tiso_gene_136]]
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*** [[Tiso_gene_135]]
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*** [[Tiso_gene_13394]]
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*** [[Tiso_gene_6884]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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* [[RXN3O-1803]]
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** 9 associated gene(s):
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*** [[Tiso_gene_135]]
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*** [[Tiso_gene_5939]]
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*** [[Tiso_gene_13394]]
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*** [[Tiso_gene_14485]]
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*** [[Tiso_gene_19302]]
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*** [[Tiso_gene_500]]
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*** [[Tiso_gene_10876]]
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*** [[Tiso_gene_136]]
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*** [[Tiso_gene_15991]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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* [[RXN3O-5293]]
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** 5 associated gene(s):
 +
*** [[Tiso_gene_10876]]
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*** [[Tiso_gene_136]]
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*** [[Tiso_gene_135]]
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*** [[Tiso_gene_13394]]
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*** [[Tiso_gene_500]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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* [[RXN3O-5304]]
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** 5 associated gene(s):
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*** [[Tiso_gene_500]]
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*** [[Tiso_gene_135]]
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*** [[Tiso_gene_13394]]
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*** [[Tiso_gene_136]]
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*** [[Tiso_gene_10876]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27982 27982]
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{{#set: common name=stearate biosynthesis III (fungi)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=fatty acid biosynthesis|stearic acid biosynthesis|octadecanoate biosynthesis|saturated fatty acid biosynthesis}}
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{{#set: common name=7-cyano-7-deazaguanine_synthase}}
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{{#set: reaction found=6}}
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{{#set: ec number=EC-6.3.4.20}}
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{{#set: total reaction=6}}
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{{#set: gene associated=Tiso_gene_10965}}
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{{#set: completion rate=100.0}}
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{{#set: in pathway=PWY-6703}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:12, 21 March 2018

Pathway PWY3O-355

  • taxonomic range:
  • common name:
    • stearate biosynthesis III (fungi)
  • Synonym(s):
    • fatty acid biosynthesis
    • stearic acid biosynthesis
    • octadecanoate biosynthesis
    • saturated fatty acid biosynthesis

Reaction(s) found

6 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY3O-355&oldid=40127"