Difference between revisions of "CDPKIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6-PHOSPHOFRUCTO-2-KINASE-RXN 6-PHOSPHOFRUCTO-2-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPKIN-RXN CDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** adenylate_kinase_d...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6-PHOSPHOFRUCTO-2-KINASE-RXN 6-PHOSPHOFRUCTO-2-KINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPKIN-RXN CDPKIN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
 
** ORF
 
** ORF
−
** fructose-_-bisphosphatase
+
** adenylate_kinase_domain-containing_protein_1
−
** fructose-_-bisphophatase
+
** nucleoside_diphosphate_kinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.105 EC-2.7.1.105]
+
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[FRUCTOSE-6P]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-535]][c] '''+''' 1 [[ADP]][c]
+
** 1 [[CDP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[CTP]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 β-D-fructofuranose 6-phosphate[c] '''=>''' 1 H+[c] '''+''' 1 β-D-fructose 2,6-bisphosphate[c] '''+''' 1 ADP[c]
+
** 1 CDP[c] '''+''' 1 ATP[c] '''=>''' 1 CTP[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_15398]]
+
* Gene: [[Tiso_gene_17272]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[annotation-experimental_annotation]]
+
* Gene: [[Tiso_gene_9290]]
 +
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-esiliculosus]]
+
* Gene: [[Tiso_gene_18224]]
−
** Source: [[orthology-creinhardtii]]
+
−
* Gene: [[Tiso_gene_804]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[Tiso_gene_2100]]
+
* Gene: [[Tiso_gene_17271]]
−
** Source: [[annotation-experimental_annotation]]
+
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-athaliana]]
+
* Gene: [[Tiso_gene_195]]
−
* Gene: [[Tiso_gene_893]]
+
** Source: [[annotation-in-silico_annotation]]
−
** Source: [[orthology-athaliana]]
+
*** Assignment: EC-NUMBER
−
* Gene: [[Tiso_gene_892]]
+
* Gene: [[Tiso_gene_16529]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-423]], fructose 2,6-bisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-423 PWY66-423]
+
* [[PWY-7205]], CMP phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7205 PWY-7205]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
Line 47: Line 49:
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
** Source: [[orthology-creinhardtii]]
+
** Source: [[orthology-synechocystis]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15653 15653]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25237 25237]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02732 R02732]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00570 R00570]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P26285 P26285]
+
−
** [http://www.uniprot.org/uniprot/P25114 P25114]
+
−
** [http://www.uniprot.org/uniprot/Q7M3I3 Q7M3I3]
+
−
** [http://www.uniprot.org/uniprot/P49872 P49872]
+
−
** [http://www.uniprot.org/uniprot/Q28830 Q28830]
+
−
** [http://www.uniprot.org/uniprot/Q91348 Q91348]
+
−
** [http://www.uniprot.org/uniprot/Q9JJH5 Q9JJH5]
+
−
** [http://www.uniprot.org/uniprot/Q16875 Q16875]
+
−
** [http://www.uniprot.org/uniprot/P07953 P07953]
+
−
** [http://www.uniprot.org/uniprot/P16118 P16118]
+
−
** [http://www.uniprot.org/uniprot/P40433 P40433]
+
−
** [http://www.uniprot.org/uniprot/Q12471 Q12471]
+
−
** [http://www.uniprot.org/uniprot/P70265 P70265]
+
−
** [http://www.uniprot.org/uniprot/P70266 P70266]
+
−
** [http://www.uniprot.org/uniprot/O24559 O24559]
+
−
** [http://www.uniprot.org/uniprot/O81398 O81398]
+
−
** [http://www.uniprot.org/uniprot/O64983 O64983]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: common name=ORF}}
 
{{#set: common name=ORF}}
−
{{#set: common name=fructose-_-bisphosphatase}}
+
{{#set: common name=adenylate_kinase_domain-containing_protein_1}}
−
{{#set: common name=fructose-_-bisphophatase}}
+
{{#set: common name=nucleoside_diphosphate_kinase}}
−
{{#set: ec number=EC-2.7.1.105}}
+
{{#set: ec number=EC-2.7.4.6}}
−
{{#set: gene associated=Tiso_gene_15398|Tiso_gene_804|Tiso_gene_2100|Tiso_gene_893|Tiso_gene_892}}
+
{{#set: gene associated=Tiso_gene_17272|Tiso_gene_9290|Tiso_gene_18224|Tiso_gene_17271|Tiso_gene_195|Tiso_gene_16529}}
−
{{#set: in pathway=PWY66-423}}
+
{{#set: in pathway=PWY-7205}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:14, 21 March 2018

Reaction CDPKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • adenylate_kinase_domain-containing_protein_1
    • nucleoside_diphosphate_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 CDP[c] + 1 ATP[c] => 1 CTP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7205, CMP phosphorylation: PWY-7205
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CDPKIN-RXN&oldid=40331"