Difference between revisions of "Tiso gene 13682"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12968 RXN-12968] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
(Created page with "Category:Gene == Gene Tiso_gene_13682 == * right end position: ** 2763 * transcription direction: ** POSITIVE * left end position: ** 26 * centisome position: ** 0.4233149...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12968 RXN-12968] ==
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== Gene Tiso_gene_13682 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2763
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* common name:
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* transcription direction:
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** chloroplast_beta-keto_acyl_reductase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
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** 26
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* centisome position:
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** 0.4233149   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[AMIDASE-RXN]]
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** 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[CPD-14404]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[CPD-14405]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 NAD(P)H[c] '''+''' 1 3-oxo-dihomo γ-linolenoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 NAD(P)+[c] '''+''' 1 3R-hydroxy-dihomo γ-linolenoyl-CoA[c]
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* Reaction: [[GUANIDINOBUTANAMIDE-NH3-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_9871]]
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* Reaction: [[PYRAZIN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[R311-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-14727]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-14728]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17608]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: automated-name-match
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** Source: [[annotation-experimental_annotation]]
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* Reaction: [[RXNN-404]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5353]], arachidonate biosynthesis I (6-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5353 PWY-5353]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7592]], arachidonate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7592 PWY-7592]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-581]]
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* [[PWY-5025]]
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* [[PWY-3161]]
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* [[ARGDEG-V-PWY]]
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* [[PWY-7308]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2763}}
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{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-1.1.1.330}}
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{{#set: left end position=26}}
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{{#set: gene associated=Tiso_gene_9871}}
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{{#set: centisome position=0.4233149    }}
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{{#set: in pathway=PWY-5353|PWY-7592}}
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{{#set: reaction associated=AMIDASE-RXN|GUANIDINOBUTANAMIDE-NH3-RXN|PYRAZIN-RXN|R311-RXN|RXN-14727|RXN-14728|RXN-17608|RXNN-404}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-581|PWY-5025|PWY-3161|ARGDEG-V-PWY|PWY-7308}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:17, 21 March 2018

Gene Tiso_gene_13682

  • right end position:
    • 2763
  • transcription direction:
    • POSITIVE
  • left end position:
    • 26
  • centisome position:
    • 0.4233149
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13682&oldid=40655"