Difference between revisions of "Tiso gene 12611"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15830 RXN-15830] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
(Created page with "Category:Gene == Gene Tiso_gene_12611 == * right end position: ** 6732 * transcription direction: ** POSITIVE * left end position: ** 21 * centisome position: ** 0.3074670...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15830 RXN-15830] ==
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== Gene Tiso_gene_12611 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6732
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* common name:
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* transcription direction:
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** ORF
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.9.3.1 EC-1.9.3.1]
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** 21
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* centisome position:
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** 0.30746707   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-13398]]
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** 4 [[Cytochromes-C-Reduced]][e] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 8 [[PROTON]][c] '''=>''' 4 [[Cytochromes-C-Oxidized]][e] '''+''' 4 [[PROTON]][e] '''+''' 2 [[WATER]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 4 a reduced c-type cytochrome[e] '''+''' 1 oxygen[c] '''+''' 8 H+[c] '''=>''' 4 an oxidized c-type cytochrome[e] '''+''' 4 H+[e] '''+''' 2 H2O[c]
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* Reaction: [[RXN-7676]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_15682]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_18053]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_18580]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_7948]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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* Reaction: [[RXN-7677]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6692]], Fe(II) oxidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6692 PWY-6692]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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== Pathways associated ==
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*** Tool: [[pathwaytools]]
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* [[PWY-5068]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=6732}}
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{{#set: common name=ORF}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-1.9.3.1}}
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{{#set: left end position=21}}
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{{#set: gene associated=Tiso_gene_15682|Tiso_gene_18053|Tiso_gene_18580|Tiso_gene_7948}}
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{{#set: centisome position=0.30746707    }}
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{{#set: in pathway=PWY-6692}}
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{{#set: reaction associated=RXN-13398|RXN-7676|RXN-7677}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: pathway associated=PWY-5068}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:19, 21 March 2018

Gene Tiso_gene_12611

  • right end position:
    • 6732
  • transcription direction:
    • POSITIVE
  • left end position:
    • 21
  • centisome position:
    • 0.30746707
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12611&oldid=40907"