Difference between revisions of "RXN1G-508"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-508 RXN1G-508] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-lignoceroyl-[acyl-car...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-508 RXN1G-508] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-200783]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** reductive TCA cycle II
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** 3-oxo-lignoceroyl-[acyl-carrier protein] reductase
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** 3-oxoacyl-(acyl-carrier-protein)
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
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** reductive tricarboxylic acid cycle
 
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** reductive tricarboxylic acid pathway
 
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** reductive citric acid cycle
 
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** reverse citric acid cycle
 
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** carbon fixation
 
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** CO2 fixation
 
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** reductive carboxylic acid cycle
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''5''' reactions found over '''12''' reactions in the full pathway
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* With identifiers:
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* [[ACONITATEDEHYDR-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[3-oxo-lignoceroyl-ACPs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxylignoceroyl-ACPs]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_13007]]
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** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 a 3-oxo-lignoceroyl-[acp][c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxylignoceroyl-[acp][c]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-synechocystis]]
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* Gene: [[Tiso_gene_9885]]
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* [[ACONITATEHYDR-RXN]]
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** Source: [[annotation-experimental_annotation]]
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** 1 associated gene(s):
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_13007]]
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* Gene: [[Tiso_gene_13083]]
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** 2 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** [[annotation-experimental_annotation]]
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** Source: [[annotation-experimental_annotation]]
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* [[FUMHYDR-RXN]]
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*** Assignment: EC-NUMBER
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** 2 associated gene(s):
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_3691]]
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== Pathways  ==
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*** [[Tiso_gene_6720]]
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* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
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** 6 reconstruction source(s) associated:
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** '''86''' reactions found over '''182''' reactions in the full pathway
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*** [[annotation-experimental_annotation]]
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== Reconstruction information  ==
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*** [[orthology-esiliculosus]]
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* Category: [[orthology]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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*** [[manual-primary_network]]
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* Category: [[annotation]]
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*** [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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* [[MALATE-DEH-RXN]]
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*** Tool: [[pathwaytools]]
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** 2 associated gene(s):
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_2323]]
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*** Tool: [[pathwaytools]]
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*** [[Tiso_gene_1990]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[SUCCCOASYN-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_15846]]
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*** [[Tiso_gene_11866]]
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** 7 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=CITRATE--COA-LIGASE-RXN CITRATE--COA-LIGASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R23-RXN R23-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7929 RXN-7929]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8457 RXN-8457]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-200783}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=reductive TCA cycle II}}
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{{#set: common name=3-oxo-lignoceroyl-[acyl-carrier protein] reductase}}
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{{#set: common name=reductive tricarboxylic acid cycle|reductive tricarboxylic acid pathway|reductive citric acid cycle|reverse citric acid cycle|carbon fixation|CO2 fixation|reductive carboxylic acid cycle}}
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{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
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{{#set: reaction found=5}}
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{{#set: ec number=EC-1.1.1.100}}
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{{#set: total reaction=12}}
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{{#set: gene associated=Tiso_gene_9885|Tiso_gene_13083}}
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{{#set: completion rate=42.0}}
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{{#set: in pathway=PWYG-321}}
 +
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:20, 21 March 2018

Reaction RXN1G-508

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxo-lignoceroyl-[acyl-carrier protein] reductase
    • 3-oxoacyl-(acyl-carrier-protein)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWYG-321, mycolate biosynthesis: PWYG-321
    • 86 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

"3-oxo-lignoceroyl-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.




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