Difference between revisions of "Tiso gene 4493"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15829 RXN-15829] == * direction: ** LEFT-TO-RIGHT * common name: ** probable_mitochondrial-proc...")
(Created page with "Category:Gene == Gene Tiso_gene_4493 == * right end position: ** 13169 * transcription direction: ** POSITIVE * left end position: ** 11810 * centisome position: ** 79.835...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15829 RXN-15829] ==
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== Gene Tiso_gene_4493 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 13169
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* common name:
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* transcription direction:
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** probable_mitochondrial-processingpeptidasesubunitbeta
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** POSITIVE
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** cytochrome_b6-fcomplexiron-sulfurchloroplastic
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* left end position:
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** ubiquinol-cytochrome_c_reductase
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** 11810
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.10.2.2 EC-1.10.2.2]
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** 79.83506   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-13037]]
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** 1 [[Ubiquinones]][c] '''+''' 2 [[Reduced-CycA1-cytochromes]][e] '''+''' 4 [[PROTON]][c] '''=>''' 1 [[Ubiquinols]][c] '''+''' 2 [[PROTON]][e] '''+''' 2 [[Oxidized-CycA1-cytochromes]][e]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a ubiquinone[c] '''+''' 2 a reduced CycA1 cytochrome[e] '''+''' 4 H+[c] '''=>''' 1 an ubiquinol[c] '''+''' 2 H+[e] '''+''' 2 an oxidized CycA1 cytochrome[e]
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* Reaction: [[RXN-13039]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-17127]]
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* Gene: [[Tiso_gene_7235]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** Assignment: automated-name-match
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* Gene: [[Tiso_gene_9627]]
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* Reaction: [[RXN-8654]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-8655]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: automated-name-match
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** Source: [[annotation-experimental_annotation]]
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* Reaction: [[RXN0-1141]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_4973]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_18330]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: automated-name-match
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* Gene: [[Tiso_gene_15926]]
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* Reaction: [[RXN0-5098]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: automated-name-match
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== Pathways  ==
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* Reaction: [[RXN0-947]]
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* [[PWY-6692]], Fe(II) oxidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6692 PWY-6692]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7382]]
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* [[PWY0-1275]]
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* [[PWY-6987]]
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* [[PWY-6984]]
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* [[PWY0-522]]
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* [[PWY0-501]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=13169}}
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{{#set: common name=probable_mitochondrial-processingpeptidasesubunitbeta}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=cytochrome_b6-fcomplexiron-sulfurchloroplastic}}
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{{#set: left end position=11810}}
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{{#set: common name=ubiquinol-cytochrome_c_reductase}}
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{{#set: centisome position=79.83506    }}
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{{#set: ec number=EC-1.10.2.2}}
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{{#set: reaction associated=RXN-13037|RXN-13039|RXN-17127|RXN-8654|RXN-8655|RXN0-1141|RXN0-5098|RXN0-947}}
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{{#set: gene associated=Tiso_gene_7235|Tiso_gene_9627|Tiso_gene_4973|Tiso_gene_18330|Tiso_gene_15926}}
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{{#set: pathway associated=PWY-7382|PWY0-1275|PWY-6987|PWY-6984|PWY0-522|PWY0-501}}
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{{#set: in pathway=PWY-6692}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:21, 21 March 2018

Gene Tiso_gene_4493

  • right end position:
    • 13169
  • transcription direction:
    • POSITIVE
  • left end position:
    • 11810
  • centisome position:
    • 79.83506
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4493&oldid=41116"