Difference between revisions of "PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN] == * direction: ** L...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** D-galactose degradation V (Leloir pathway)
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** peptide-aspartate_beta-dioxygenase
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** aspartyl_asparaginyl_beta-hydroxylase
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** aspartyl_asparaginylbeta-hydroxylase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.14.11.16 EC-1.14.11.16]
 
* Synonym(s):
 
* Synonym(s):
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** Leloir pathway
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''5''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[ALDOSE1EPIM-RXN]]
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** 1 [[Protein-L-Aspartates]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[Peptide-3-hydroxy-L-Aspartates]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_17734]]
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** 1 a [protein]-L-aspartate[c] '''+''' 1 oxygen[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 a [protein]-3-hydroxy-L-aspartate[c] '''+''' 1 succinate[c] '''+''' 1 CO2[c]
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*** [[Tiso_gene_19779]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-experimental_annotation]]
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* Gene: [[Tiso_gene_7631]]
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* [[GALACTOKIN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 5 associated gene(s):
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_11795]]
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* Gene: [[Tiso_gene_19054]]
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*** [[Tiso_gene_12191]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_5041]]
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* Gene: [[Tiso_gene_17313]]
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*** [[Tiso_gene_10797]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_5042]]
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* Gene: [[Tiso_gene_10501]]
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** 5 reconstruction source(s) associated:
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** Source: [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_17769]]
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*** [[orthology-athaliana]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-creinhardtii]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_19156]]
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*** [[annotation-experimental_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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* [[GALACTURIDYLYLTRANS-RXN]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** 1 associated gene(s):
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* Gene: [[Tiso_gene_16225]]
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*** [[Tiso_gene_2435]]
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** Source: [[annotation-in-silico_annotation]]
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** 3 reconstruction source(s) associated:
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_7632]]
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*** [[annotation-experimental_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[PHOSPHOGLUCMUT-RXN]]
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== Pathways  ==
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** 2 associated gene(s):
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== Reconstruction information  ==
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*** [[Tiso_gene_4816]]
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* Category: [[orthology]]
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*** [[Tiso_gene_13477]]
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** Source: [[orthology-esiliculosus]]
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** 3 reconstruction source(s) associated:
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*** Tool: [[pantograph]]
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*** [[annotation-in-silico_annotation]]
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* Category: [[annotation]]
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*** [[manual-primary_network]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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* [[UDPGLUCEPIM-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_9823]]
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*** [[Tiso_gene_15395]]
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*** [[Tiso_gene_3236]]
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*** [[Tiso_gene_10797]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2759}}
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* RHEA:
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{{#set: common name=D-galactose degradation V (Leloir pathway)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11508 11508]
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{{#set: common name=Leloir pathway}}
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* LIGAND-RXN:
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{{#set: reaction found=5}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04073 R04073]
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{{#set: total reaction=5}}
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* UNIPROT:
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/Q28056 Q28056]
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** [http://www.uniprot.org/uniprot/Q93178 Q93178]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=peptide-aspartate_beta-dioxygenase}}
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{{#set: common name=aspartyl_asparaginyl_beta-hydroxylase}}
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{{#set: common name=aspartyl_asparaginylbeta-hydroxylase}}
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{{#set: ec number=EC-1.14.11.16}}
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{{#set: gene associated=Tiso_gene_7631|Tiso_gene_19054|Tiso_gene_17313|Tiso_gene_10501|Tiso_gene_17769|Tiso_gene_19156|Tiso_gene_16225|Tiso_gene_7632}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:23, 21 March 2018

Reaction PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • peptide-aspartate_beta-dioxygenase
    • aspartyl_asparaginyl_beta-hydroxylase
    • aspartyl_asparaginylbeta-hydroxylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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