Difference between revisions of "RXN-14271"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.78-RXN 3.2.1.78-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** endo-beta-_-mannanase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14271 RXN-14271] == * direction: ** LEFT-TO-RIGHT * common name: ** (S)-3-hydroxypalmitoyl-CoA...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.78-RXN 3.2.1.78-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14271 RXN-14271] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** endo-beta-_-mannanase
+
** (S)-3-hydroxypalmitoyl-CoA oxidoreductase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.1.78 EC-3.2.1.78]
+
** [http://enzyme.expasy.org/EC/1.1.1.211 EC-1.1.1.211]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[1-4-Mannan]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[Short-Mannan]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[CPD0-2232]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[3-OXOPALMITOYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a β-(1,4)-D-mannan[c] '''+''' 1 H2O[c] '''=>''' 2 a β-(1,4)-mannan oligosaccharide[c]
+
** 1 NAD+[c] '''+''' 1 (S)-3-hydroxyhexadecanoyl-CoA[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 3-oxo-palmitoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_8816]]
+
* Gene: [[Tiso_gene_5857]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_14262]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7456]], β-(1,4)-mannan degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7456 PWY-7456]
+
* [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654]
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
** '''6''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7656]], Spodoptera littoralis pheromone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7656 PWY-7656]
 +
** '''6''' reactions found over '''22''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/P16699 P16699]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31160 31160]
−
** [http://www.uniprot.org/uniprot/P22533 P22533]
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/O66185 O66185]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04737 R04737]
−
** [http://www.uniprot.org/uniprot/O48540 O48540]
+
−
** [http://www.uniprot.org/uniprot/Q9M0H6 Q9M0H6]
+
−
** [http://www.uniprot.org/uniprot/P49425 P49425]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=endo-beta-_-mannanase}}
+
{{#set: common name=(S)-3-hydroxypalmitoyl-CoA oxidoreductase}}
−
{{#set: ec number=EC-3.2.1.78}}
+
{{#set: ec number=EC-1.1.1.211}}
−
{{#set: gene associated=Tiso_gene_8816}}
+
{{#set: gene associated=Tiso_gene_5857|Tiso_gene_14262}}
−
{{#set: in pathway=PWY-7456}}
+
{{#set: in pathway=PWY-7654|PWY-7656}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|annotation-in-silico_annotation|orthology-athaliana|orthology-esiliculosus}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:24, 21 March 2018

Reaction RXN-14271

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • (S)-3-hydroxypalmitoyl-CoA oxidoreductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 (S)-3-hydroxyhexadecanoyl-CoA[c] => 1 NADH[c] + 1 H+[c] + 1 3-oxo-palmitoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7654, (8E,10E)-dodeca-8,10-dienol biosynthesis: PWY-7654
    • 6 reactions found over 11 reactions in the full pathway
  • PWY-7656, Spodoptera littoralis pheromone biosynthesis: PWY-7656
    • 6 reactions found over 22 reactions in the full pathway

Reconstruction information

External links





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