Difference between revisions of "PWY-1722"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5822 RXN-5822] == * direction: ** LEFT-TO-RIGHT * common name: ** purple_acid_phosphatase-like_...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5822 RXN-5822] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** purple_acid_phosphatase-like_protein
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** formate assimilation into 5,10-methylenetetrahydrofolate
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** alkaline_phosphatase_d
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** acid_phosphatase
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** ORF
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** alkaline_phosphatase
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** histidine_acid_phosphatase_domain_containing_2a
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.3.2 EC-3.1.3.2]
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** [http://enzyme.expasy.org/EC/3.1.3.1 EC-3.1.3.1]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''3''' reactions in the full pathway
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** 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[NAD]][c]
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* [[FORMATETHFLIG-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 NADP+[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 NAD+[c]
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*** [[Tiso_gene_432]]
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*** [[Tiso_gene_7582]]
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== Genes associated with this reaction  ==
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** 4 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-experimental_annotation]]
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* Gene: [[Tiso_gene_9372]]
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*** [[manual-primary_network]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_17309]]
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* [[METHENYLTHFCYCLOHYDRO-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 0 associated gene:
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*** Assignment: EC-NUMBER
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** 1 reconstruction source(s) associated:
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* Gene: [[Tiso_gene_15256]]
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*** [[manual-primary_network]]
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** Source: [[annotation-in-silico_annotation]]
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* [[METHYLENETHFDEHYDROG-NADP-RXN]]
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*** Assignment: EC-NUMBER
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** 2 associated gene(s):
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* Gene: [[Tiso_gene_3271]]
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*** [[Tiso_gene_6004]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_432]]
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*** Assignment: EC-NUMBER
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** 3 reconstruction source(s) associated:
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* Gene: [[Tiso_gene_8159]]
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*** [[manual-primary_network]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_10738]]
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== Reaction(s) not found ==
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5996]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_17310]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5083]], NAD/NADH phosphorylation and dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5083 PWY-5083]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[NADPHOS-DEPHOS-PWY]], NAD phosphorylation and dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=NADPHOS-DEPHOS-PWY NADPHOS-DEPHOS-PWY]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[NAD-BIOSYNTHESIS-II]], NAD salvage pathway III: [http://metacyc.org/META/NEW-IMAGE?object=NAD-BIOSYNTHESIS-II NAD-BIOSYNTHESIS-II]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28050 28050]
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{{#set: taxonomic range=TAX-2157}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00118 R00118]
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{{#set: common name=formate assimilation into 5,10-methylenetetrahydrofolate}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=3}}
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{{#set: common name=purple_acid_phosphatase-like_protein}}
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{{#set: total reaction=3}}
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{{#set: common name=alkaline_phosphatase_d}}
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{{#set: completion rate=100.0}}
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{{#set: common name=acid_phosphatase}}
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{{#set: common name=ORF}}
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{{#set: common name=alkaline_phosphatase}}
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{{#set: common name=histidine_acid_phosphatase_domain_containing_2a}}
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{{#set: ec number=EC-3.1.3.2}}
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{{#set: ec number=EC-3.1.3.1}}
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{{#set: gene associated=Tiso_gene_9372|Tiso_gene_17309|Tiso_gene_15256|Tiso_gene_3271|Tiso_gene_8159|Tiso_gene_10738|Tiso_gene_5996|Tiso_gene_17310}}
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{{#set: in pathway=PWY-5083|NADPHOS-DEPHOS-PWY|NAD-BIOSYNTHESIS-II}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:25, 21 March 2018

Pathway PWY-1722

  • taxonomic range:
  • common name:
    • formate assimilation into 5,10-methylenetetrahydrofolate
  • Synonym(s):

Reaction(s) found

3 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-1722&oldid=41453"