Difference between revisions of "PWY-5097"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.6.3.8-RXN 3.6.3.8-RXN] == * direction: ** REVERSIBLE * common name: ** Calcium-transporting ATPas...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.6.3.8-RXN 3.6.3.8-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1783257 TAX-1783257]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
 
* common name:
 
* common name:
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** Calcium-transporting ATPase 1, endoplasmic reticulum-type
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** L-lysine biosynthesis VI
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* ec number:
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** [http://enzyme.expasy.org/EC/3.6.3.8 EC-3.6.3.8]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''7''' reactions found over '''7''' reactions in the full pathway
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** 1 [[ATP]][e] '''+''' 1 [[WATER]][e] '''+''' 1 [[CA+2]][e] '''<=>''' 1 [[Pi]][e] '''+''' 1 [[CA+2]][c] '''+''' 1 [[PROTON]][e] '''+''' 1 [[ADP]][e]
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* [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 ATP[e] '''+''' 1 H2O[e] '''+''' 1 Ca2+[e] '''<=>''' 1 phosphate[e] '''+''' 1 Ca2+[c] '''+''' 1 H+[e] '''+''' 1 ADP[e]
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*** [[Tiso_gene_18603]]
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** 7 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_10760]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[orthology-synechocystis]]
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== Pathways  ==
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*** [[manual-primary_network]]
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== Reconstruction information  ==
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*** [[orthology-creinhardtii]]
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* Category: [[annotation]]
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* [[ASPARTATEKIN-RXN]]
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** Source: [[annotation-experimental_annotation]]
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** 4 associated gene(s):
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*** Tool: [[pathwaytools]]
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*** [[Tiso_gene_4345]]
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*** [[Tiso_gene_17057]]
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*** [[Tiso_gene_13809]]
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*** [[Tiso_gene_16097]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[DIAMINOPIMDECARB-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_10737]]
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*** [[Tiso_gene_12041]]
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** 6 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[DIAMINOPIMEPIM-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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* [[DIHYDRODIPICSYN-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_14829]]
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** 3 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-14014]]
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** 1 associated gene(s):
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*** [[Tiso_gene_13314]]
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** 3 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[RXN-7737]]
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** 1 associated gene(s):
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*** [[Tiso_gene_18833]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ARACYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18105 18105]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5097 PWY-5097]
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* UNIPROT:
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{{#set: taxonomic range=TAX-183939}}
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** [http://www.uniprot.org/uniprot/Q9LF79 Q9LF79]
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{{#set: taxonomic range=TAX-183925}}
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** [http://www.uniprot.org/uniprot/P11505 P11505]
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{{#set: taxonomic range=TAX-1783257}}
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** [http://www.uniprot.org/uniprot/Q63080 Q63080]
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{{#set: taxonomic range=TAX-1117}}
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** [http://www.uniprot.org/uniprot/Q28059 Q28059]
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{{#set: taxonomic range=TAX-3398}}
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** [http://www.uniprot.org/uniprot/P16615 P16615]
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{{#set: common name=L-lysine biosynthesis VI}}
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** [http://www.uniprot.org/uniprot/P11507 P11507]
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{{#set: reaction found=7}}
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** [http://www.uniprot.org/uniprot/P20647 P20647]
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{{#set: total reaction=7}}
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** [http://www.uniprot.org/uniprot/P18596 P18596]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/Q64568 Q64568]
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** [http://www.uniprot.org/uniprot/P23634 P23634]
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** [http://www.uniprot.org/uniprot/P22189 P22189]
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** [http://www.uniprot.org/uniprot/P22700 P22700]
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** [http://www.uniprot.org/uniprot/Q03669 Q03669]
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** [http://www.uniprot.org/uniprot/Q28164 Q28164]
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** [http://www.uniprot.org/uniprot/Q64566 Q64566]
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** [http://www.uniprot.org/uniprot/Q27764 Q27764]
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** [http://www.uniprot.org/uniprot/Q64578 Q64578]
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** [http://www.uniprot.org/uniprot/P11506 P11506]
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** [http://www.uniprot.org/uniprot/Q63139 Q63139]
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** [http://www.uniprot.org/uniprot/Q27721 Q27721]
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** [http://www.uniprot.org/uniprot/P13586 P13586]
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** [http://www.uniprot.org/uniprot/P13587 P13587]
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** [http://www.uniprot.org/uniprot/P04191 P04191]
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** [http://www.uniprot.org/uniprot/P11607 P11607]
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** [http://www.uniprot.org/uniprot/P35316 P35316]
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** [http://www.uniprot.org/uniprot/P23220 P23220]
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** [http://www.uniprot.org/uniprot/Q00804 Q00804]
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** [http://www.uniprot.org/uniprot/Q00779 Q00779]
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** [http://www.uniprot.org/uniprot/Q92105 Q92105]
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** [http://www.uniprot.org/uniprot/Q01896 Q01896]
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** [http://www.uniprot.org/uniprot/Q42883 Q42883]
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** [http://www.uniprot.org/uniprot/Q08853 Q08853]
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** [http://www.uniprot.org/uniprot/P38360 P38360]
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** [http://www.uniprot.org/uniprot/P38929 P38929]
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** [http://www.uniprot.org/uniprot/Q64542 Q64542]
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** [http://www.uniprot.org/uniprot/P39986 P39986]
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** [http://www.uniprot.org/uniprot/Q12691 Q12691]
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** [http://www.uniprot.org/uniprot/Q49063 Q49063]
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** [http://www.uniprot.org/uniprot/O22218 O22218]
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** [http://www.uniprot.org/uniprot/O23087 O23087]
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** [http://www.uniprot.org/uniprot/O04938 O04938]
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** [http://www.uniprot.org/uniprot/O81108 O81108]
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** [http://www.uniprot.org/uniprot/P93067 P93067]
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** [http://www.uniprot.org/uniprot/Q27642 Q27642]
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** [http://www.uniprot.org/uniprot/Q27829 Q27829]
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** [http://www.uniprot.org/uniprot/O59868 O59868]
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** [http://www.uniprot.org/uniprot/Q37145 Q37145]
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** [http://www.uniprot.org/uniprot/Q9XES1 Q9XES1]
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** [http://www.uniprot.org/uniprot/Q9SY55 Q9SY55]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Calcium-transporting ATPase 1, endoplasmic reticulum-type}}
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{{#set: ec number=EC-3.6.3.8}}
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{{#set: gene associated=Tiso_gene_10760}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:25, 21 March 2018

Pathway PWY-5097

Reaction(s) found

7 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links





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