Difference between revisions of "Tiso gene 3856"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6382 RXN-6382] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Gene == Gene Tiso_gene_3856 == * right end position: ** 3334 * transcription direction: ** NEGATIVE * left end position: ** 1467 * centisome position: ** 9.21193...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6382 RXN-6382] ==
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== Gene Tiso_gene_3856 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3334
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
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** NEGATIVE
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* left end position:
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** 1467
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* centisome position:
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** 9.21193   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[KETOACYLCOATHIOL-RXN]]
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** 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[CPD-6082]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[B-ALANINE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 NAD(P)+[c] '''+''' 1 3-aminopropanal[c] '''+''' 1 H2O[c] '''=>''' 2 H+[c] '''+''' 1 β-alanine[c] '''+''' 1 NAD(P)H[c]
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* Reaction: [[RXN-10699]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-10700]]
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* Gene: [[Tiso_gene_3513]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-athaliana]]
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*** Assignment: ec-number
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[RXN-10701]]
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* Gene: [[Tiso_gene_7322]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-athaliana]]
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-11246]]
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* [[PWY-3981]], β-alanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3981 PWY-3981]
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** Source: [[annotation-in-silico_annotation]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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*** Assignment: ec-number
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* [[PWY-5760]], β-alanine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5760 PWY-5760]
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* Reaction: [[RXN-12565]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: ec-number
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* Category: [[orthology]]
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* Reaction: [[RXN-12710]]
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** Source: [[orthology-athaliana]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pantograph]]
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*** Assignment: ec-number
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[RXN-13617]]
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*** Tool: [[pantograph]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14268]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14274]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14277]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14774]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14788]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14793]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14799]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14803]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16137]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17116]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17778]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17782]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17787]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17791]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17795]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17799]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6435]]
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* [[PWY-7654]]
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* [[PWY66-391]]
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* [[PWY-7606]]
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* [[PWY-7337]]
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* [[PWY-7340]]
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* [[PWY-7338]]
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* [[PWY-7094]]
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* [[PWY-6946]]
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* [[FAO-PWY]]
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* [[PWY-735]]
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* [[PWY-5136]]
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* [[PWY-7726]]
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* [[PWY-6863]]
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* [[PWY-7339]]
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* [[PWY-6948]]
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* [[PWY-7288]]
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* [[PWY-6945]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3334}}
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{{#set: ec number=EC-1.2.1}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: gene associated=Tiso_gene_3513|Tiso_gene_7322}}
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{{#set: left end position=1467}}
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{{#set: in pathway=PWY-3981|PWY-5760}}
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{{#set: centisome position=9.21193    }}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction associated=KETOACYLCOATHIOL-RXN|RXN-10699|RXN-10700|RXN-10701|RXN-11246|RXN-12565|RXN-12710|RXN-13617|RXN-14268|RXN-14274|RXN-14277|RXN-14394|RXN-14774|RXN-14788|RXN-14793|RXN-14799|RXN-14803|RXN-16137|RXN-17116|RXN-17778|RXN-17782|RXN-17787|RXN-17791|RXN-17795|RXN-17799}}
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{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii}}
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{{#set: pathway associated=PWY-6435|PWY-7654|PWY66-391|PWY-7606|PWY-7337|PWY-7340|PWY-7338|PWY-7094|PWY-6946|FAO-PWY|PWY-735|PWY-5136|PWY-7726|PWY-6863|PWY-7339|PWY-6948|PWY-7288|PWY-6945}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:26, 21 March 2018

Gene Tiso_gene_3856

  • right end position:
    • 3334
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 1467
  • centisome position:
    • 9.21193
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3856&oldid=41585"