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| | [[Category:Pathway]] | | [[Category:Pathway]] |
| − | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6524 PWY-6524] == |
| | * taxonomic range: | | * taxonomic range: |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208] | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3568 TAX-3568] |
| | * common name: | | * common name: |
| − | ** gluconeogenesis III | + | ** lychnose and isolychnose biosynthesis |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| | == Reaction(s) found == | | == Reaction(s) found == |
| − | '''10''' reactions found over '''12''' reactions in the full pathway | + | '''1''' reactions found over '''4''' reactions in the full pathway |
| − | * [[2PGADEHYDRAT-RXN]] | + | * [[2.4.1.123-RXN]] |
| − | ** 4 associated gene(s):
| + | |
| − | *** [[Tiso_gene_8720]]
| + | |
| − | *** [[Tiso_gene_14718]]
| + | |
| − | *** [[Tiso_gene_5619]]
| + | |
| − | *** [[Tiso_gene_13317]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[F16ALDOLASE-RXN]]
| + | |
| − | ** 6 associated gene(s):
| + | |
| − | *** [[Tiso_gene_12272]]
| + | |
| − | *** [[Tiso_gene_65]]
| + | |
| − | *** [[Tiso_gene_9119]]
| + | |
| − | *** [[Tiso_gene_14568]]
| + | |
| − | *** [[Tiso_gene_9179]]
| + | |
| − | *** [[Tiso_gene_9118]]
| + | |
| − | ** 5 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | * [[F16BDEPHOS-RXN]]
| + | |
| − | ** 7 associated gene(s):
| + | |
| − | *** [[Tiso_gene_15398]]
| + | |
| − | *** [[Tiso_gene_9435]]
| + | |
| − | *** [[Tiso_gene_16502]]
| + | |
| − | *** [[Tiso_gene_4905]]
| + | |
| − | *** [[Tiso_gene_8226]]
| + | |
| − | *** [[Tiso_gene_4904]]
| + | |
| − | *** [[Tiso_gene_3483]]
| + | |
| − | ** 6 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[GAPOXNPHOSPHN-RXN]]
| + | |
| − | ** 5 associated gene(s):
| + | |
| − | *** [[Tiso_gene_20000]]
| + | |
| − | *** [[Tiso_gene_235]]
| + | |
| − | *** [[Tiso_gene_10646]]
| + | |
| − | *** [[Tiso_gene_3344]]
| + | |
| − | *** [[Tiso_gene_6766]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[MALATE-DEH-RXN]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[Tiso_gene_2323]]
| + | |
| − | *** [[Tiso_gene_1990]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[PGLUCISOM-RXN]]
| + | |
| | ** 1 associated gene(s): | | ** 1 associated gene(s): |
| − | *** [[Tiso_gene_19480]] | + | *** [[Tiso_gene_18913]] |
| − | ** 3 reconstruction source(s) associated: | + | ** 1 reconstruction source(s) associated: |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[PHOSGLYPHOS-RXN]]
| + | |
| − | ** 6 associated gene(s):
| + | |
| − | *** [[Tiso_gene_3526]]
| + | |
| − | *** [[Tiso_gene_18264]]
| + | |
| − | *** [[Tiso_gene_3527]]
| + | |
| − | *** [[Tiso_gene_18263]]
| + | |
| − | *** [[Tiso_gene_12104]]
| + | |
| − | *** [[Tiso_gene_14642]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[PYRUVATE-CARBOXYLASE-RXN]]
| + | |
| − | ** 3 associated gene(s):
| + | |
| − | *** [[Tiso_gene_15144]]
| + | |
| − | *** [[Tiso_gene_15145]]
| + | |
| − | *** [[Tiso_gene_2812]]
| + | |
| − | ** 4 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[RXN-15513]]
| + | |
| − | ** 8 associated gene(s):
| + | |
| − | *** [[Tiso_gene_7201]]
| + | |
| − | *** [[Tiso_gene_14530]]
| + | |
| − | *** [[Tiso_gene_16271]]
| + | |
| − | *** [[Tiso_gene_9922]]
| + | |
| − | *** [[Tiso_gene_2841]]
| + | |
| − | *** [[Tiso_gene_2365]]
| + | |
| − | *** [[Tiso_gene_14664]]
| + | |
| − | *** [[Tiso_gene_9923]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | * [[TRIOSEPISOMERIZATION-RXN]]
| + | |
| − | ** 4 associated gene(s):
| + | |
| − | *** [[Tiso_gene_19961]]
| + | |
| − | *** [[Tiso_gene_20000]]
| + | |
| − | *** [[Tiso_gene_19962]]
| + | |
| − | *** [[Tiso_gene_10646]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| | *** [[orthology-creinhardtii]] | | *** [[orthology-creinhardtii]] |
| | == Reaction(s) not found == | | == Reaction(s) not found == |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=4.1.1.32-RXN 4.1.1.32-RXN] | + | * [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.82-RXN 2.4.1.82-RXN] |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=RXN66-526 RXN66-526] | + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-11490 RXN-11490] |
| | + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-15224 RXN-15224] |
| | == External links == | | == External links == |
| − | {{#set: taxonomic range=TAX-33208}} | + | {{#set: taxonomic range=TAX-3568}} |
| − | {{#set: common name=gluconeogenesis III}} | + | {{#set: common name=lychnose and isolychnose biosynthesis}} |
| − | {{#set: reaction found=10}} | + | {{#set: reaction found=1}} |
| − | {{#set: total reaction=12}} | + | {{#set: total reaction=4}} |
| − | {{#set: completion rate=83.0}} | + | {{#set: completion rate=25.0}} |
