Difference between revisions of "PWY-6829"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMAMIDASE-RXN FORMAMIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** formamidase * e...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6829 PWY-6829] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMAMIDASE-RXN FORMAMIDASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6829 PWY-6829] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
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** formamidase
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** tRNA methylation (yeast)
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* ec number:
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** [http://enzyme.expasy.org/EC/3.5.1.49 EC-3.5.1.49]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''15''' reactions in the full pathway
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** 1 [[FORMAMIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[AMMONIUM]][c]
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* [[RXN-11856]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 formamide[c] '''+''' 1 H2O[c] '''=>''' 1 formate[c] '''+''' 1 ammonium[c]
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*** [[Tiso_gene_3065]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-12375]]
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* Gene: [[Tiso_gene_13559]]
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** 2 associated gene(s):
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_9360]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_16307]]
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* Gene: [[Tiso_gene_13558]]
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** 2 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[annotation-experimental_annotation]]
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== Pathways  ==
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* [[RXN-12376]]
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* [[PWY-7142]], cyanide detoxification II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7142 PWY-7142]
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** 2 associated gene(s):
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** '''1''' reactions found over '''2''' reactions in the full pathway
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*** [[Tiso_gene_9360]]
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== Reconstruction information  ==
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*** [[Tiso_gene_16307]]
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* Category: [[annotation]]
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** 2 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** [[annotation-experimental_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11857 RXN-11857]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11858 RXN-11858]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11859 RXN-11859]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11868 RXN-11868]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12368 RXN-12368]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12374 RXN-12374]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12461 RXN-12461]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12466 RXN-12466]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12477 RXN-12477]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12478 RXN-12478]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12479 RXN-12479]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14517 RXN-14517]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21948 21948]
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{{#set: common name=tRNA methylation (yeast)}}
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* LIGAND-RXN:
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{{#set: reaction found=3}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00524 R00524]
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{{#set: total reaction=15}}
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* UNIPROT:
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{{#set: completion rate=20.0}}
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** [http://www.uniprot.org/uniprot/Q50228 Q50228]
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** [http://www.uniprot.org/uniprot/Q9SZE9 Q9SZE9]
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** [http://www.uniprot.org/uniprot/Q9SZF0 Q9SZF0]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=formamidase}}
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{{#set: ec number=EC-3.5.1.49}}
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{{#set: gene associated=Tiso_gene_13559|Tiso_gene_13558}}
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{{#set: in pathway=PWY-7142}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:27, 21 March 2018

Pathway PWY-6829

  • taxonomic range:
  • common name:
    • tRNA methylation (yeast)
  • Synonym(s):

Reaction(s) found

3 reactions found over 15 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6829&oldid=41736"