Difference between revisions of "Tiso gene 12149"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-363 RXN0-363] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside_hydrolase * ec num...")
(Created page with "Category:Gene == Gene Tiso_gene_12149 == * right end position: ** 3437 * transcription direction: ** POSITIVE * left end position: ** 2173 * centisome position: ** 29.9270...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-363 RXN0-363] ==
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== Gene Tiso_gene_12149 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3437
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* common name:
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* transcription direction:
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** nucleoside_hydrolase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.2.2.1 EC-3.2.2.1]
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** 2173
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* centisome position:
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** 29.927006   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[XANTHOSINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[XANTHINE]][c] '''+''' 1 [[D-Ribofuranose]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 xanthosine[c] '''+''' 1 H2O[c] '''=>''' 1 xanthine[c] '''+''' 1 D-ribofuranose[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* Gene: [[Tiso_gene_11910]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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* Gene: [[Tiso_gene_12995]]
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* Reaction: [[RXN-12196]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN0-5462]]
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* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6607]], guanosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6607 PWY-6607]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3437}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27994 27994]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=2173}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02143 R02143]
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{{#set: centisome position=29.927006    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: common name=nucleoside_hydrolase}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: ec number=EC-3.2.2.1}}
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{{#set: gene associated=Tiso_gene_11910|Tiso_gene_12995}}
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{{#set: in pathway=PWY-6596|PWY-6607}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:29, 21 March 2018

Gene Tiso_gene_12149

  • right end position:
    • 3437
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2173
  • centisome position:
    • 29.927006
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12149&oldid=41915"