Difference between revisions of "LEUCINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-OXOPROLINE 5-OXOPROLINE] == * smiles: ** C(=O)(C1(NC(CC1)=O))[O-] * common name: ** 5-oxo-L-p...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCINE--TRNA-LIGASE-RXN LEUCINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-OXOPROLINE 5-OXOPROLINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCINE--TRNA-LIGASE-RXN LEUCINE--TRNA-LIGASE-RXN] ==
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* smiles:
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* direction:
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** C(=O)(C1(NC(CC1)=O))[O-]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** 5-oxo-L-proline
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** leucine--trna_ligase
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* inchi key:
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** ORF
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** InChIKey=ODHCTXKNWHHXJC-VKHMYHEASA-M
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/6.1.1.4 EC-6.1.1.4]
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** 128.107   
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* Synonym(s):
 
* Synonym(s):
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** pyrrolidone-COO
 
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** pyrrolidone-carboxylate
 
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** L-5-pyrrolidone-2-carboxylic acid
 
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** L-pyroglutamic acid
 
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** 5-oxo-L-proline
 
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** pyroglutamic acid
 
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** pyroglutamate
 
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** 5-pyrrolidone-2-carboxylic acid
 
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** L-pyroglutamate
 
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** Pidolic acid
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[5-OXOPROLINASE-ATP-HYDROLYSING-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[LEU]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[LEU-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Charged-LEU-tRNAs]][c]
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* [[GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 L-leucine[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAleu[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 an L-leucyl-[tRNAleu][c]
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 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_11524]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_15439]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 98-79-3
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11688 11688]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5289118 5289118]
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* LIGAND-RXN:
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* HMDB : HMDB00267
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** [http://www.genome.jp/dbget-bin/www_bget?R03657 R03657]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C01879 C01879]
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** [http://www.uniprot.org/uniprot/O27552 O27552]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P56457 P56457]
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** [http://www.chemspider.com/Chemical-Structure.4451146.html 4451146]
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** [http://www.uniprot.org/uniprot/O51267 O51267]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/O83595 O83595]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58402 58402]
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** [http://www.uniprot.org/uniprot/O84211 O84211]
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{{#set: smiles=C(=O)(C1(NC(CC1)=O))[O-]}}
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** [http://www.uniprot.org/uniprot/Q9Z930 Q9Z930]
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{{#set: common name=5-oxo-L-proline}}
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** [http://www.uniprot.org/uniprot/P47508 P47508]
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{{#set: inchi key=InChIKey=ODHCTXKNWHHXJC-VKHMYHEASA-M}}
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** [http://www.uniprot.org/uniprot/P36430 P36430]
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{{#set: molecular weight=128.107    }}
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** [http://www.uniprot.org/uniprot/O66680 O66680]
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{{#set: common name=pyrrolidone-COO|pyrrolidone-carboxylate|L-5-pyrrolidone-2-carboxylic acid|L-pyroglutamic acid|5-oxo-L-proline|pyroglutamic acid|pyroglutamate|5-pyrrolidone-2-carboxylic acid|L-pyroglutamate|Pidolic acid}}
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** [http://www.uniprot.org/uniprot/O67646 O67646]
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{{#set: consumed by=5-OXOPROLINASE-ATP-HYDROLYSING-RXN}}
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** [http://www.uniprot.org/uniprot/Q9ZDB1 Q9ZDB1]
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{{#set: produced by=GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9WY15 Q9WY15]
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** [http://www.uniprot.org/uniprot/Q9PNK3 Q9PNK3]
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** [http://www.uniprot.org/uniprot/Q9JW39 Q9JW39]
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** [http://www.uniprot.org/uniprot/Q9ZJ63 Q9ZJ63]
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** [http://www.uniprot.org/uniprot/Q9JXT2 Q9JXT2]
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** [http://www.uniprot.org/uniprot/P43827 P43827]
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** [http://www.uniprot.org/uniprot/O58698 O58698]
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** [http://www.uniprot.org/uniprot/Q9CHB6 Q9CHB6]
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** [http://www.uniprot.org/uniprot/P26637 P26637]
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** [http://www.uniprot.org/uniprot/P75398 P75398]
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** [http://www.uniprot.org/uniprot/P73274 P73274]
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** [http://www.uniprot.org/uniprot/Q48955 Q48955]
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** [http://www.uniprot.org/uniprot/Q48964 Q48964]
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** [http://www.uniprot.org/uniprot/Q49051 Q49051]
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** [http://www.uniprot.org/uniprot/P11325 P11325]
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** [http://www.uniprot.org/uniprot/P07813 P07813]
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** [http://www.uniprot.org/uniprot/P10857 P10857]
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** [http://www.uniprot.org/uniprot/P15181 P15181]
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** [http://www.uniprot.org/uniprot/Q50192 Q50192]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=leucine--trna_ligase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-6.1.1.4}}
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{{#set: gene associated=Tiso_gene_11524|Tiso_gene_15439}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:32, 21 March 2018

Reaction LEUCINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • leucine--trna_ligase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-leucine[c] + 1 ATP[c] + 1 a tRNAleu[c] => 1 diphosphate[c] + 1 AMP[c] + 1 an L-leucyl-[tRNAleu][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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