Difference between revisions of "CHD-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6326 PWY-6326] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-16921 TAX-1...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] == * direction: ** REVERSIBLE * common name: ** glucose-methanol-choline_oxidoredu...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6326 PWY-6326] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-16921 TAX-16921]
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4321 TAX-4321]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4289 TAX-4289]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-24966 TAX-24966]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4056 TAX-4056]
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* common name:
 
* common name:
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** camptothecin biosynthesis
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** glucose-methanol-choline_oxidoreductase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.99.1 EC-1.1.99.1]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''7''' reactions in the full pathway
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* With identifiers:
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* [[STRICTOSIDINE-SYNTHASE-RXN]]
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** 1 [[Acceptor]][c] '''+''' 1 [[CHOLINE]][c] '''<=>''' 1 [[BETAINE_ALDEHYDE]][c] '''+''' 1 [[Donor-H2]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_8474]]
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** 1 an oxidized electron acceptor[c] '''+''' 1 choline[c] '''<=>''' 1 betaine aldehyde[c] '''+''' 1 a reduced electron acceptor[c]
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*** [[Tiso_gene_8473]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_16765]]
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== Reaction(s) not found ==
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.3.3.9-RXN 1.3.3.9-RXN]
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10859 RXN-10859]
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* [[CHOLINE-BETAINE-ANA-PWY]], choline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14030 RXN-14030]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14031 RXN-14031]
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* [[BETSYN-PWY]], glycine betaine biosynthesis I (Gram-negative bacteria): [http://metacyc.org/META/NEW-IMAGE?object=BETSYN-PWY BETSYN-PWY]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14036 RXN-14036]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-16921}}
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* RHEA:
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{{#set: taxonomic range=TAX-4321}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17433 17433]
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{{#set: taxonomic range=TAX-4289}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-24966}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01025 R01025]
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{{#set: taxonomic range=TAX-4056}}
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* UNIPROT:
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{{#set: common name=camptothecin biosynthesis}}
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** [http://www.uniprot.org/uniprot/P17444 P17444]
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{{#set: reaction found=1}}
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{{#set: direction=REVERSIBLE}}
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{{#set: total reaction=7}}
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{{#set: common name=glucose-methanol-choline_oxidoreductase}}
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{{#set: completion rate=14.0}}
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{{#set: ec number=EC-1.1.99.1}}
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{{#set: gene associated=Tiso_gene_16765}}
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{{#set: in pathway=CHOLINE-BETAINE-ANA-PWY|BETSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:32, 21 March 2018

Reaction CHD-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • glucose-methanol-choline_oxidoreductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an oxidized electron acceptor[c] + 1 choline[c] <=> 1 betaine aldehyde[c] + 1 a reduced electron acceptor[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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