Difference between revisions of "RXN-10699"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10699 RXN-10699] == * direction: ** LEFT-TO-RIGHT * common name: ** acetyl-_c-acetyltransferase...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10699 RXN-10699] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** 2-methylbutanoate biosynthesis
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** acetyl-_c-acetyltransferase
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** 3-ketoacyl-_thiolase
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** thiolase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
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** 2-methylbutyrate biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[METHYLACETOACETYLCOATHIOL-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[CPD-11520]][c] '''=>''' 1 [[CPD-11521]][c] '''+''' 1 [[ACETYL-COA]][c]
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** 3 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_16181]]
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** 1 coenzyme A[c] '''+''' 1 OPC8-3-ketoacyl-CoA[c] '''=>''' 1 OPC6-CoA[c] '''+''' 1 acetyl-CoA[c]
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*** [[Tiso_gene_17451]]
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*** [[Tiso_gene_15327]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-athaliana]]
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* Gene: [[Tiso_gene_3855]]
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[TIGLYLCOA-HYDROXY-RXN]]
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*** Assignment: EC-NUMBER
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** 5 associated gene(s):
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_14257]]
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_14262]]
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* Gene: [[Tiso_gene_17451]]
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*** [[Tiso_gene_6885]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_5857]]
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_16145]]
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** Source: [[annotation-experimental_annotation]]
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** 2 reconstruction source(s) associated:
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*** Assignment: EC-NUMBER
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*** [[orthology-athaliana]]
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* Gene: [[Tiso_gene_15327]]
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-experimental_annotation]]
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== Reaction(s) not found ==
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.178-RXN 1.1.1.178-RXN]
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* Gene: [[Tiso_gene_10116]]
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* [http://metacyc.org/META/NEW-IMAGE?object=2-METHYLACYL-COA-DEHYDROGENASE-RXN 2-METHYLACYL-COA-DEHYDROGENASE-RXN]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PROPIONATE-COA-TRANSFERASE-RXN PROPIONATE-COA-TRANSFERASE-RXN]
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15031 RXN-15031]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_3856]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
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** '''15''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33208}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=2-methylbutanoate biosynthesis}}
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{{#set: common name=acetyl-_c-acetyltransferase}}
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{{#set: common name=2-methylbutyrate biosynthesis}}
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{{#set: common name=3-ketoacyl-_thiolase}}
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{{#set: reaction found=2}}
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{{#set: common name=thiolase}}
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{{#set: total reaction=6}}
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: completion rate=33.0}}
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{{#set: gene associated=Tiso_gene_3855|Tiso_gene_17451|Tiso_gene_15327|Tiso_gene_10116|Tiso_gene_3856}}
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{{#set: in pathway=PWY-735}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:32, 21 March 2018

Reaction RXN-10699

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acetyl-_c-acetyltransferase
    • 3-ketoacyl-_thiolase
    • thiolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 OPC8-3-ketoacyl-CoA[c] => 1 OPC6-CoA[c] + 1 acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 15 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10699&oldid=42234"