Difference between revisions of "METHIONYL-TRNA-FORMYLTRANSFERASE-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_9394 == * Synonym(s): == Reactions associated == * Reaction: ACYLCOASYN-RXN ** Source: annotation-in-silico_annotation *** Assignm...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHIONYL-TRNA-FORMYLTRANSFERASE-RXN METHIONYL-TRNA-FORMYLTRANSFERASE-RXN] == * direction: ** LEFT-...")
 
Line 1: Line 1:
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_9394 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHIONYL-TRNA-FORMYLTRANSFERASE-RXN METHIONYL-TRNA-FORMYLTRANSFERASE-RXN] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 +
* common name:
 +
** methionyl-trna_formyltransferase
 +
** ribosomal_rna_small_subunit_methyltransferase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.1.2.9 EC-2.1.2.9]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
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== Reaction Formula ==
−
* Reaction: [[ACYLCOASYN-RXN]]
+
* With identifiers:
 +
** 1 [[L-methionyl-tRNAfmet]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[THF-GLU-N]][c] '''+''' 1 [[N-formyl-L-methionyl-tRNAfmet]][c]
 +
* With common name(s):
 +
** 1 an L-methionyl-[initiator tRNAmet][c] '''+''' 1 an N10-formyl-tetrahydrofolate[c] '''=>''' 1 H+[c] '''+''' 1 a tetrahydrofolate[c] '''+''' 1 an N-formyl-L-methionyl-[initiator tRNAmet][c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_13560]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: ec-number
+
*** Assignment: AUTOMATED-NAME-MATCH
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
−
*** Assignment: ec-number
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_13561]]
−
* Reaction: [[FACOAL18111Z]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
* Reaction: [[LINOLENOYL-RXN]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: ec-number
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
* Reaction: [[LNLCCOAL]]
+
* Gene: [[Tiso_gene_9355]]
−
** Source: [[orthology-creinhardtii]]
+
−
* Reaction: [[LNLNCACOAL]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
* Reaction: [[R223-RXN]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: ec-number
+
*** Assignment: EC-NUMBER
−
** Source: [[annotation-experimental_annotation]]
+
== Pathways  ==
−
*** Assignment: ec-number
+
== Reconstruction information  ==
−
** Source: [[orthology-esiliculosus]]
+
* Category: [[orthology]]
−
* Reaction: [[RXN-12184]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
* Reaction: [[RXN-12978]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Reaction: [[RXN-13290]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Reaction: [[RXN-13614]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Reaction: [[RXN-16380]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[orthology-creinhardtii]]
+
−
* Reaction: [[RXN-16389]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
* Reaction: [[RXN-16393]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
* Reaction: [[RXN-16401]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
* Reaction: [[RXN-16402]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
* Reaction: [[RXN-16415]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
* Reaction: [[RXN-16418]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
* Reaction: [[RXN-7904]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Reaction: [[RXN-9623]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
* Reaction: [[RXN-9644]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Reaction: [[RXN-9673]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Reaction: [[RXN0-7238]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
* Reaction: [[RXN0-7239]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
* Reaction: [[RXN0-7248]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
* Reaction: [[RXN66-469]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Reaction: [[RXN66-477]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Reaction: [[RXN66-480]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Reaction: [[RXN66-483]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Reaction: [[RXN66-484]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: ec-number
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
* Reaction: [[TRANS-RXN0-623]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: ec-number
+
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
−
*** Assignment: ec-number
+
*** Tool: [[pathwaytools]]
−
== Pathways associated ==
+
−
* [[PWY-6920]]
+
−
* [[P221-PWY]]
+
−
* [[PWY-321]]
+
−
* [[PWY-5972]]
+
−
* [[PWY-5971]]
+
−
* [[PWY-7033]]
+
−
* [[PWY-5136]]
+
−
* [[PWY66-389]]
+
−
* [[PWY-7288]]
+
−
* [[PWY-6733]]
+
−
* [[PWY-7094]]
+
−
* [[PWY66-391]]
+
−
* [[FAO-PWY]]
+
−
* [[PWY-1121]]
+
−
* [[PWY-6873]]
+
−
* [[PWY-5147]]
+
−
* [[PWY-5143]]
+
−
* [[PWY-5885]]
+
−
* [[PWY-7724]]
+
−
* [[PWY-6001]]
+
−
* [[PWY-6000]]
+
−
* [[PWY-7049]]
+
−
* [[PWY66-387]]
+
−
* [[PWY-5989]]
+
−
* [[PWY-6803]]
+
−
* [[PWY66-388]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: reaction associated=ACYLCOASYN-RXN|FACOAL18111Z|LINOLENOYL-RXN|LNLCCOAL|LNLNCACOAL|R223-RXN|RXN-12184|RXN-12978|RXN-13290|RXN-13614|RXN-16380|RXN-16389|RXN-16393|RXN-16401|RXN-16402|RXN-16415|RXN-16418|RXN-7904|RXN-9623|RXN-9644|RXN-9673|RXN0-7238|RXN0-7239|RXN0-7248|RXN66-469|RXN66-477|RXN66-480|RXN66-483|RXN66-484|TRANS-RXN0-623}}
+
* LIGAND-RXN:
−
{{#set: pathway associated=PWY-6920|P221-PWY|PWY-321|PWY-5972|PWY-5971|PWY-7033|PWY-5136|PWY66-389|PWY-7288|PWY-6733|PWY-7094|PWY66-391|FAO-PWY|PWY-1121|PWY-6873|PWY-5147|PWY-5143|PWY-5885|PWY-7724|PWY-6001|PWY-6000|PWY-7049|PWY66-387|PWY-5989|PWY-6803|PWY66-388}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03940 R03940]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P94463 P94463]
 +
** [http://www.uniprot.org/uniprot/Q9PJ28 Q9PJ28]
 +
** [http://www.uniprot.org/uniprot/P50932 P50932]
 +
** [http://www.uniprot.org/uniprot/P47605 P47605]
 +
** [http://www.uniprot.org/uniprot/P44787 P44787]
 +
** [http://www.uniprot.org/uniprot/P56461 P56461]
 +
** [http://www.uniprot.org/uniprot/Q9CEE9 Q9CEE9]
 +
** [http://www.uniprot.org/uniprot/O51091 O51091]
 +
** [http://www.uniprot.org/uniprot/Q9JWY9 Q9JWY9]
 +
** [http://www.uniprot.org/uniprot/P23882 P23882]
 +
** [http://www.uniprot.org/uniprot/P32785 P32785]
 +
** [http://www.uniprot.org/uniprot/P75235 P75235]
 +
** [http://www.uniprot.org/uniprot/Q55163 Q55163]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=methionyl-trna_formyltransferase}}
 +
{{#set: common name=ribosomal_rna_small_subunit_methyltransferase}}
 +
{{#set: ec number=EC-2.1.2.9}}
 +
{{#set: gene associated=Tiso_gene_13560|Tiso_gene_13561|Tiso_gene_9355}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:33, 21 March 2018

Reaction METHIONYL-TRNA-FORMYLTRANSFERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • methionyl-trna_formyltransferase
    • ribosomal_rna_small_subunit_methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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