Difference between revisions of "PWY-5194"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCEROL-KIN-RXN GLYCEROL-KIN-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.exp...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5194 PWY-5194] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183980 TAX-...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCEROL-KIN-RXN GLYCEROL-KIN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5194 PWY-5194] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183980 TAX-183980]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://enzyme.expasy.org/EC/2.7.1.30 EC-2.7.1.30]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
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** siroheme biosynthesis
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''4''' reactions in the full pathway
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** 1 [[GLYCEROL]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[GLYCEROL-3P]][c]
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* [[DIMETHUROPORDEHYDROG-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 glycerol[c] '''+''' 1 ATP[c] '''<=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 sn-glycerol 3-phosphate[c]
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*** [[Tiso_gene_8614]]
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*** [[Tiso_gene_15852]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_12434]]
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* [[RXN-8675]]
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** Source: [[orthology-athaliana]]
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** 1 associated gene(s):
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_8614]]
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** Source: [[orthology-creinhardtii]]
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** 1 reconstruction source(s) associated:
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* Gene: [[Tiso_gene_16670]]
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*** [[orthology-esiliculosus]]
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** Source: [[orthology-synechocystis]]
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* [[UROPORIIIMETHYLTRANSA-RXN]]
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== Pathways  ==
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** 1 associated gene(s):
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* [[PWY-4261]], glycerol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4261 PWY-4261]
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*** [[Tiso_gene_8614]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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** 1 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[orthology-esiliculosus]]
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* Category: [[orthology]]
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== Reaction(s) not found ==
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** Source: [[orthology-athaliana]]
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* [http://metacyc.org/META/NEW-IMAGE?object=SIROHEME-FERROCHELAT-RXN SIROHEME-FERROCHELAT-RXN]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21644 21644]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5194 PWY-5194]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-183980}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00847 R00847]
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{{#set: taxonomic range=TAX-33090}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.uniprot.org/uniprot/P18157 P18157]
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/P47284 P47284]
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{{#set: common name=siroheme biosynthesis}}
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** [http://www.uniprot.org/uniprot/Q9CG64 Q9CG64]
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{{#set: reaction found=3}}
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** [http://www.uniprot.org/uniprot/Q9V207 Q9V207]
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{{#set: total reaction=4}}
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** [http://www.uniprot.org/uniprot/P44400 P44400]
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{{#set: completion rate=75.0}}
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** [http://www.uniprot.org/uniprot/Q9WX53 Q9WX53]
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** [http://www.uniprot.org/uniprot/Q7M0X5 Q7M0X5]
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** [http://www.uniprot.org/uniprot/P0A6F3 P0A6F3]
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** [http://www.uniprot.org/uniprot/P25013 P25013]
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** [http://www.uniprot.org/uniprot/P19255 P19255]
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** [http://www.uniprot.org/uniprot/P32190 P32190]
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** [http://www.uniprot.org/uniprot/P32189 P32189]
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** [http://www.uniprot.org/uniprot/P95907 P95907]
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** [http://www.uniprot.org/uniprot/Q49011 Q49011]
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** [http://www.uniprot.org/uniprot/O93623 O93623]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-2.7.1.30}}
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{{#set: gene associated=Tiso_gene_12434|Tiso_gene_16670}}
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{{#set: in pathway=PWY-4261}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:37, 21 March 2018

Pathway PWY-5194

Reaction(s) found

3 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links





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