Difference between revisions of "PWY-735"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3Prime-OH-Terminated-RNAs 3Prime-OH-Terminated-RNAs] == * common name: ** an [RNA]-3'-hydroxyl...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-330...")
 
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3Prime-OH-Terminated-RNAs 3Prime-OH-Terminated-RNAs] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735] ==
 +
* taxonomic range:
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
−
** an [RNA]-3'-hydroxyl
+
** jasmonic acid biosynthesis
 
* Synonym(s):
 
* Synonym(s):
−
** a 5'-hydroxyl terminated RNA
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** jasmonate biosynthesis
−
** 5'-hydroxy-[RNA]
+
  
−
== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
−
* [[RXN-17927]]
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'''15''' reactions found over '''19''' reactions in the full pathway
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* [[RNA-LIGASE-ATP-RXN]]
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* [[RXN-10695]]
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== Reaction(s) known to produce the compound ==
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** 2 associated gene(s):
−
== Reaction(s) of unknown directionality ==
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*** [[Tiso_gene_14183]]
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*** [[Tiso_gene_12275]]
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** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10696]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_18566]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
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* [[RXN-10697]]
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** 3 associated gene(s):
 +
*** [[Tiso_gene_16145]]
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*** [[Tiso_gene_14262]]
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*** [[Tiso_gene_6885]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10698]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_14026]]
 +
*** [[Tiso_gene_14027]]
 +
*** [[Tiso_gene_5857]]
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*** [[Tiso_gene_18839]]
 +
*** [[Tiso_gene_14262]]
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*** [[Tiso_gene_18838]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10699]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_3855]]
 +
*** [[Tiso_gene_17451]]
 +
*** [[Tiso_gene_15327]]
 +
*** [[Tiso_gene_10116]]
 +
*** [[Tiso_gene_3856]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-10700]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_15327]]
 +
*** [[Tiso_gene_10116]]
 +
*** [[Tiso_gene_3855]]
 +
*** [[Tiso_gene_17451]]
 +
*** [[Tiso_gene_3856]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-10701]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_3855]]
 +
*** [[Tiso_gene_10116]]
 +
*** [[Tiso_gene_17451]]
 +
*** [[Tiso_gene_3856]]
 +
*** [[Tiso_gene_15327]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-10702]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_18838]]
 +
*** [[Tiso_gene_5857]]
 +
*** [[Tiso_gene_18839]]
 +
*** [[Tiso_gene_14027]]
 +
*** [[Tiso_gene_14026]]
 +
*** [[Tiso_gene_14262]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10703]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_18838]]
 +
*** [[Tiso_gene_5857]]
 +
*** [[Tiso_gene_18839]]
 +
*** [[Tiso_gene_14262]]
 +
*** [[Tiso_gene_14027]]
 +
*** [[Tiso_gene_14026]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10704]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_16145]]
 +
*** [[Tiso_gene_6885]]
 +
*** [[Tiso_gene_14262]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10705]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_14262]]
 +
*** [[Tiso_gene_16145]]
 +
*** [[Tiso_gene_6885]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10706]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_18566]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10707]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_18566]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10708]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_10984]]
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*** [[Tiso_gene_801]]
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*** [[Tiso_gene_7477]]
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*** [[Tiso_gene_800]]
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** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-1321]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_4463]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=12-OXOPHYTODIENOATE-REDUCTASE-RXN 12-OXOPHYTODIENOATE-REDUCTASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=ALLENE-OXIDE-CYCLASE-RXN ALLENE-OXIDE-CYCLASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-745 RXN-745]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-19 RXN1F-19]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=an [RNA]-3'-hydroxyl}}
+
* ARACYC:
−
{{#set: common name=a 5'-hydroxyl terminated RNA|5'-hydroxy-[RNA]}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-735 PWY-735]
−
{{#set: consumed by=RXN-17927|RNA-LIGASE-ATP-RXN}}
+
{{#set: taxonomic range=TAX-33090}}
 +
{{#set: common name=jasmonic acid biosynthesis}}
 +
{{#set: common name=jasmonate biosynthesis}}
 +
{{#set: reaction found=15}}
 +
{{#set: total reaction=19}}
 +
{{#set: completion rate=79.0}}

Latest revision as of 19:37, 21 March 2018

Pathway PWY-735

  • taxonomic range:
  • common name:
    • jasmonic acid biosynthesis
  • Synonym(s):
    • jasmonate biosynthesis

Reaction(s) found

15 reactions found over 19 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-735&oldid=42833"