Difference between revisions of "Tiso gene 11231"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALDOSE1EPIM-RXN ALDOSE1EPIM-RXN] == * direction: ** REVERSIBLE * common name: ** aldose_1-epimerase...")
(Created page with "Category:Gene == Gene Tiso_gene_11231 == * right end position: ** 2753 * transcription direction: ** POSITIVE * left end position: ** 358 * centisome position: ** 4.508248...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALDOSE1EPIM-RXN ALDOSE1EPIM-RXN] ==
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== Gene Tiso_gene_11231 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 2753
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* common name:
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* transcription direction:
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** aldose_1-epimerase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/5.1.3.3 EC-5.1.3.3]
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** 358
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* centisome position:
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** 4.5082483   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACETYLORNTRANSAM-RXN]]
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** 1 [[GALACTOSE]][c] '''<=>''' 1 [[ALPHA-D-GALACTOSE]][c]
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* With common name(s):
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** 1 &beta;-D-galactose[c] '''<=>''' 1 &alpha;-D-galactose[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_17734]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: automated-name-match
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* Gene: [[Tiso_gene_19779]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
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== Pathways  ==
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* [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[GABATRANSAM-RXN]]
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** Source: [[orthology-synechocystis]]
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* Reaction: [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
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** Source: [[orthology-synechocystis]]
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* Reaction: [[RXN-15007]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[PWY-4321]]
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* [[GLUTORN-PWY]]
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* [[PWY-6922]]
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* [[GLUDEG-I-PWY]]
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* [[PWY-6344]]
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* [[PWY-3341]]
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* [[P181-PWY]]
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* [[GLYSYN-ALA-PWY]]
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* [[ARGASEDEG-PWY]]
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* [[PWY-5022]]
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* [[PWY-5154]]
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* [[PWY-6536]]
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* [[PWY-6535]]
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* [[ARGSYNBSUB-PWY]]
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* [[PWY-4981]]
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* [[PWY-7400]]
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* [[PWY-6537]]
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* [[ARG-PRO-PWY]]
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* [[ARGININE-SYN4-PWY]]
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* [[CITRULBIO-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2753}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28675 28675]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=REVERSIBLE}}
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{{#set: left end position=358}}
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{{#set: common name=aldose_1-epimerase}}
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{{#set: centisome position=4.5082483    }}
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{{#set: ec number=EC-5.1.3.3}}
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{{#set: reaction associated=ACETYLORNTRANSAM-RXN|ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN|GABATRANSAM-RXN|ORNITHINE-GLU-AMINOTRANSFERASE-RXN|RXN-15007}}
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{{#set: gene associated=Tiso_gene_17734|Tiso_gene_19779}}
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{{#set: pathway associated=PWY-4321|GLUTORN-PWY|PWY-6922|GLUDEG-I-PWY|PWY-6344|PWY-3341|P181-PWY|GLYSYN-ALA-PWY|ARGASEDEG-PWY|PWY-5022|PWY-5154|PWY-6536|PWY-6535|ARGSYNBSUB-PWY|PWY-4981|PWY-7400|PWY-6537|ARG-PRO-PWY|ARGININE-SYN4-PWY|CITRULBIO-PWY}}
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{{#set: in pathway=PWY-6317|PWY66-422}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:39, 21 March 2018

Gene Tiso_gene_11231

  • right end position:
    • 2753
  • transcription direction:
    • POSITIVE
  • left end position:
    • 358
  • centisome position:
    • 4.5082483
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11231&oldid=43049"