Difference between revisions of "HEME-BIOSYNTHESIS-II"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183963 TAX-...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAG...")
 
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183963 TAX-183963]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183924 TAX-183924]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
−
** Entner-Doudoroff pathway III (semi-phosphorylative)
+
** heme biosynthesis I (aerobic)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''5''' reactions found over '''9''' reactions in the full pathway
+
  '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[2PGADEHYDRAT-RXN]]
+
* [[PROTOHEMEFERROCHELAT-RXN]]
−
** 4 associated gene(s):
+
** 2 associated gene(s):
−
*** [[Tiso_gene_8720]]
+
*** [[Tiso_gene_3284]]
−
*** [[Tiso_gene_14718]]
+
*** [[Tiso_gene_15900]]
−
*** [[Tiso_gene_5619]]
+
** 6 reconstruction source(s) associated:
−
*** [[Tiso_gene_13317]]
+
*** [[annotation-experimental_annotation]]
−
** 7 reconstruction source(s) associated:
+
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-creinhardtii]]
 +
* [[PROTOPORGENOXI-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_11986]]
 +
*** [[Tiso_gene_15401]]
 +
** 6 reconstruction source(s) associated:
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
Line 23: Line 32:
 
*** [[orthology-synechocystis]]
 
*** [[orthology-synechocystis]]
 
*** [[manual-primary_network]]
 
*** [[manual-primary_network]]
−
*** [[orthology-creinhardtii]]
+
* [[RXN0-1461]]
−
* [[3PGAREARR-RXN]]
+
** 5 associated gene(s):
−
** 16 associated gene(s):
+
*** [[Tiso_gene_3671]]
−
*** [[Tiso_gene_15048]]
+
*** [[Tiso_gene_2247]]
−
*** [[Tiso_gene_7201]]
+
*** [[Tiso_gene_13364]]
−
*** [[Tiso_gene_9922]]
+
*** [[Tiso_gene_13365]]
−
*** [[Tiso_gene_2841]]
+
*** [[Tiso_gene_2246]]
−
*** [[Tiso_gene_14530]]
+
−
*** [[Tiso_gene_16754]]
+
−
*** [[Tiso_gene_2365]]
+
−
*** [[Tiso_gene_16271]]
+
−
*** [[Tiso_gene_5468]]
+
−
*** [[Tiso_gene_20311]]
+
−
*** [[Tiso_gene_14664]]
+
−
*** [[Tiso_gene_15391]]
+
−
*** [[Tiso_gene_14212]]
+
−
*** [[Tiso_gene_10516]]
+
−
*** [[Tiso_gene_9923]]
+
−
*** [[Tiso_gene_2667]]
+
 
** 7 reconstruction source(s) associated:
 
** 7 reconstruction source(s) associated:
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
Line 50: Line 47:
 
*** [[manual-primary_network]]
 
*** [[manual-primary_network]]
 
*** [[orthology-creinhardtii]]
 
*** [[orthology-creinhardtii]]
−
* [[GLUCONOLACT-RXN]]
+
* [[UROGENDECARBOX-RXN]]
−
** 3 associated gene(s):
+
−
*** [[Tiso_gene_1947]]
+
−
*** [[Tiso_gene_15098]]
+
−
*** [[Tiso_gene_1948]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
* [[KDPGALDOL-RXN]]
+
−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_12620]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-esiliculosus]]
+
−
* [[PEPDEPHOS-RXN]]
+
 
** 4 associated gene(s):
 
** 4 associated gene(s):
−
*** [[Tiso_gene_18206]]
+
*** [[Tiso_gene_18743]]
−
*** [[Tiso_gene_14504]]
+
*** [[Tiso_gene_19684]]
−
*** [[Tiso_gene_974]]
+
*** [[Tiso_gene_18744]]
−
*** [[Tiso_gene_14505]]
+
*** [[Tiso_gene_5173]]
−
** 7 reconstruction source(s) associated:
+
** 6 reconstruction source(s) associated:
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
*** [[orthology-athaliana]]
 
 
*** [[orthology-synechocystis]]
 
*** [[orthology-synechocystis]]
 
*** [[manual-primary_network]]
 
*** [[manual-primary_network]]
 
*** [[orthology-creinhardtii]]
 
*** [[orthology-creinhardtii]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=DEOXYGLUCONOKIN-RXN DEOXYGLUCONOKIN-RXN]
 
−
* [http://metacyc.org/META/NEW-IMAGE?object=GLUCONATE-DEHYDRATASE-RXN GLUCONATE-DEHYDRATASE-RXN]
 
−
* [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE-1-DEHYDROGENASE-NADP+-RXN GLUCOSE-1-DEHYDROGENASE-NADP+-RXN]
 
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-3443 RXN-3443]
 
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-183963}}
+
* ECOCYC:
−
{{#set: taxonomic range=TAX-183924}}
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II]
−
{{#set: common name=Entner-Doudoroff pathway III (semi-phosphorylative)}}
+
* SGD-PATHWAY : HEME-BIOSYNTHESIS-II
−
{{#set: reaction found=5}}
+
* HUMANCYC : HEME-BIOSYNTHESIS-II
−
{{#set: total reaction=9}}
+
* PLASMOCYC : HEME-BIOSYNTHESIS-II
−
{{#set: completion rate=56.0}}
+
{{#set: taxonomic range=TAX-2}}
 +
{{#set: taxonomic range=TAX-2759}}
 +
{{#set: common name=heme biosynthesis I (aerobic)}}
 +
{{#set: reaction found=4}}
 +
{{#set: total reaction=4}}
 +
{{#set: completion rate=100.0}}

Latest revision as of 19:41, 21 March 2018

Pathway HEME-BIOSYNTHESIS-II

  • taxonomic range:
  • common name:
    • heme biosynthesis I (aerobic)
  • Synonym(s):

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

  • ECOCYC:
  • SGD-PATHWAY : HEME-BIOSYNTHESIS-II
  • HUMANCYC : HEME-BIOSYNTHESIS-II
  • PLASMOCYC : HEME-BIOSYNTHESIS-II




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