Difference between revisions of "GERANYLGERANYL-PP"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R07562 R07562] == * direction: ** LEFT-TO-RIGHT * common name: ** R101 * Synonym(s): == Reaction F...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANYLGERANYL-PP GERANYLGERANYL-PP] == * smiles: ** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R07562 R07562] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANYLGERANYL-PP GERANYLGERANYL-PP] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]
 
* common name:
 
* common name:
−
** R101
+
** geranylgeranyl diphosphate
 +
* inchi key:
 +
** InChIKey=OINNEUNVOZHBOX-QIRCYJPOSA-K
 +
* molecular weight:
 +
** 447.424   
 
* Synonym(s):
 
* Synonym(s):
 +
** all-trans-geranyl-geranyl-pp
 +
** geranylgeranyl-PP
 +
** GGPP
 +
** geranylgeranyl diphosphate
 +
** (2E,6E,10E)-geranylgeranyl diphosphate
 +
** ω,E,E,E-geranylgeranyl diphosphate
 +
** (2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl diphosphate
 +
** all-trans-geranylgeranyl diphosphate
 +
** 2-trans,6-trans,10-trans-geranylgeranyl diphosphate
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[RXN-7663]]
−
** 1.0 [[PROTON]][c] '''+''' 1.0 [[NADH]][c] '''+''' 1.0 [[CPD-7850]][c] '''+''' 1.0 [[OXYGEN-MOLECULE]][c] '''=>''' 1.0 [[NAD]][c] '''+''' 1.0 [[CPD-7860]][c] '''+''' 1.0 [[WATER]][c]
+
* [[2.5.1.32-RXN]]
−
* With common name(s):
+
* [[RXN-11486]]
−
** 1.0 H+[c] '''+''' 1.0 NADH[c] '''+''' 1.0 echinenone[c] '''+''' 1.0 oxygen[c] '''=>''' 1.0 NAD+[c] '''+''' 1.0 3-hydroxyechinenone[c] '''+''' 1.0 H2O[c]
+
* [[RXN-10625]]
−
 
+
== Reaction(s) known to produce the compound ==
−
== Genes associated with this reaction  ==
+
* [[GGPS]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[FARNESYLTRANSTRANSFERASE-RXN]]
−
* Gene: [[Tiso_gene_10837]]
+
== Reaction(s) of unknown directionality ==
−
** Source: [[orthology-synechocystis]]
+
* [[RXN-7673]]
−
== Pathways  ==
+
* [[RXN-7658]]
−
== Reconstruction information  ==
+
* [[RXN1F-144]]
−
* Category: [[orthology]]
+
* [[RXN-3701]]
−
** Source: [[orthology-synechocystis]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* DRUGBANK : DB07841
−
{{#set: common name=R101}}
+
* PUBCHEM:
−
{{#set: gene associated=Tiso_gene_10837}}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5497105 5497105]
−
{{#set: in pathway=}}
+
* HMDB : HMDB04486
−
{{#set: reconstruction category=orthology}}
+
* LIGAND-CPD:
−
{{#set: reconstruction source=orthology-synechocystis}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C00353 C00353]
−
{{#set: reconstruction tool=pantograph}}
+
* CHEMSPIDER:
 +
** [http://www.chemspider.com/Chemical-Structure.4593687.html 4593687]
 +
* CHEBI:
 +
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58756 58756]
 +
* METABOLIGHTS : MTBLC58756
 +
{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]}}
 +
{{#set: common name=geranylgeranyl diphosphate}}
 +
{{#set: inchi key=InChIKey=OINNEUNVOZHBOX-QIRCYJPOSA-K}}
 +
{{#set: molecular weight=447.424    }}
 +
{{#set: common name=all-trans-geranyl-geranyl-pp|geranylgeranyl-PP|GGPP|geranylgeranyl diphosphate|(2E,6E,10E)-geranylgeranyl diphosphate|ω,E,E,E-geranylgeranyl diphosphate|(2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl diphosphate|all-trans-geranylgeranyl diphosphate|2-trans,6-trans,10-trans-geranylgeranyl diphosphate}}
 +
{{#set: consumed by=RXN-7663|2.5.1.32-RXN|RXN-11486|RXN-10625}}
 +
{{#set: produced by=GGPS|FARNESYLTRANSTRANSFERASE-RXN}}
 +
{{#set: reversible reaction associated=RXN-7673|RXN-7658|RXN1F-144|RXN-3701}}

Latest revision as of 20:43, 21 March 2018

Metabolite GERANYLGERANYL-PP

  • smiles:
    • CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]
  • common name:
    • geranylgeranyl diphosphate
  • inchi key:
    • InChIKey=OINNEUNVOZHBOX-QIRCYJPOSA-K
  • molecular weight:
    • 447.424
  • Synonym(s):
    • all-trans-geranyl-geranyl-pp
    • geranylgeranyl-PP
    • GGPP
    • geranylgeranyl diphosphate
    • (2E,6E,10E)-geranylgeranyl diphosphate
    • ω,E,E,E-geranylgeranyl diphosphate
    • (2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl diphosphate
    • all-trans-geranylgeranyl diphosphate
    • 2-trans,6-trans,10-trans-geranylgeranyl diphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • DRUGBANK : DB07841
  • PUBCHEM:
  • HMDB : HMDB04486
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC58756
"CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GERANYLGERANYL-PP&oldid=43455"