Difference between revisions of "UTCY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCCOASYN-RXN SUCCCOASYN-RXN] == * direction: ** REVERSIBLE * common name: ** succinyl-_ligase * e...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UTCY UTCY] == * direction: ** LEFT-TO-RIGHT * common name: ** UTP:cytidine 5'-phosphotransferase *...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCCOASYN-RXN SUCCCOASYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UTCY UTCY] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** succinyl-_ligase
+
** UTP:cytidine 5'-phosphotransferase
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/6.2.1.5 EC-6.2.1.5]
+
 
* Synonym(s):
 
* Synonym(s):
−
** Succinate thiokinase
 
−
** succinyl CoA synthesis
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[SUC]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[Pi]][c] '''+''' 1 [[SUC-COA]][c] '''+''' 1 [[ADP]][c]
+
** 1.0 [[CYTIDINE]][c] '''+''' 1.0 [[UTP]][c] '''=>''' 1.0 [[CMP]][c] '''+''' 1.0 [[PROTON]][c] '''+''' 1.0 [[UDP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 succinate[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''<=>''' 1 phosphate[c] '''+''' 1 succinyl-CoA[c] '''+''' 1 ADP[c]
+
** 1.0 cytidine[c] '''+''' 1.0 UTP[c] '''=>''' 1.0 CMP[c] '''+''' 1.0 H+[c] '''+''' 1.0 UDP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_15846]]
+
* Gene: [[Tiso_gene_14474]]
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-synechocystis]]
+
−
** Source: [[orthology-esiliculosus]]
+
 
** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
−
* Gene: [[Tiso_gene_11866]]
+
* Gene: [[Tiso_gene_20134]]
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-synechocystis]]
+
−
** Source: [[orthology-esiliculosus]]
+
 
** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
 
−
** '''9''' reactions found over '''11''' reactions in the full pathway
 
−
* [[P42-PWY]], incomplete reductive TCA cycle: [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384]
 
−
** '''7''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5392]], reductive TCA cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392]
 
−
** '''5''' reactions found over '''12''' reactions in the full pathway
 
−
* [[P23-PWY]], reductive TCA cycle I: [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY]
 
−
** '''7''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5690]], TCA cycle II (plants and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969]
 
−
** '''9''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728]
 
−
** '''11''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-5538]], pyruvate fermentation to acetate VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5538 PWY-5538]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5537]], pyruvate fermentation to acetate V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5537 PWY-5537]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[TCA]], TCA cycle I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA]
 
−
** '''7''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17661 17661]
+
{{#set: common name=UTP:cytidine 5'-phosphotransferase}}
−
* LIGAND-RXN:
+
{{#set: gene associated=Tiso_gene_14474|Tiso_gene_20134}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00405 R00405]
+
{{#set: in pathway=}}
−
* UNIPROT:
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/O28098 O28098]
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
** [http://www.uniprot.org/uniprot/P53594 P53594]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/O28733 O28733]
+
−
** [http://www.uniprot.org/uniprot/P45101 P45101]
+
−
** [http://www.uniprot.org/uniprot/P45102 P45102]
+
−
** [http://www.uniprot.org/uniprot/Q9JUT0 Q9JUT0]
+
−
** [http://www.uniprot.org/uniprot/Q58643 Q58643]
+
−
** [http://www.uniprot.org/uniprot/O26663 O26663]
+
−
** [http://www.uniprot.org/uniprot/P80886 P80886]
+
−
** [http://www.uniprot.org/uniprot/Q9PHY1 Q9PHY1]
+
−
** [http://www.uniprot.org/uniprot/Q9JUS9 Q9JUS9]
+
−
** [http://www.uniprot.org/uniprot/P80865 P80865]
+
−
** [http://www.uniprot.org/uniprot/Q9PHY0 Q9PHY0]
+
−
** [http://www.uniprot.org/uniprot/O67729 O67729]
+
−
** [http://www.uniprot.org/uniprot/O67546 O67546]
+
−
** [http://www.uniprot.org/uniprot/P53593 P53593]
+
−
** [http://www.uniprot.org/uniprot/P0AGE9 P0AGE9]
+
−
** [http://www.uniprot.org/uniprot/P0A836 P0A836]
+
−
** [http://www.uniprot.org/uniprot/O82662 O82662]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=succinyl-_ligase}}
+
−
{{#set: ec number=EC-6.2.1.5}}
+
−
{{#set: common name=Succinate thiokinase|succinyl CoA synthesis}}
+
−
{{#set: gene associated=Tiso_gene_15846|Tiso_gene_11866}}
+
−
{{#set: in pathway=PWY-5913|P42-PWY|PWY-7384|PWY-5392|P23-PWY|PWY-5690|PWY-6969|PWY-6728|PWY-5538|PWY-5537|PWY66-398|TCA}}
+
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:47, 21 March 2018

Reaction UTCY

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • UTP:cytidine 5'-phosphotransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 cytidine[c] + 1.0 UTP[c] => 1.0 CMP[c] + 1.0 H+[c] + 1.0 UDP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=UTCY&oldid=43747"