Difference between revisions of "GLU6PDEHYDROG-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4450 PWYQT-4450] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3699 TA...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLU6PDEHYDROG-RXN GLU6PDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glucose-6-p...")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4450 PWYQT-4450] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLU6PDEHYDROG-RXN GLU6PDEHYDROG-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3699 TAX-3699]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** aliphatic glucosinolate biosynthesis, side chain elongation cycle
+
** glucose-6-phosphate_1-dehydrogenase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.49 EC-1.1.1.49]
 
* Synonym(s):
 
* Synonym(s):
−
** methionine elongation
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''10''' reactions found over '''30''' reactions in the full pathway
+
* With identifiers:
−
* [[RXN-18200]]
+
** 1 [[NADP]][c] '''+''' 1 [[D-glucopyranose-6-phosphate]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[D-6-P-GLUCONO-DELTA-LACTONE]][c]
−
** 1 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_2920]]
+
** 1 NADP+[c] '''+''' 1 D-glucopyranose 6-phosphate[c] '''=>''' 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 6-phospho D-glucono-1,5-lactone[c]
−
** 1 reconstruction source(s) associated:
+
 
−
*** [[annotation-experimental_annotation]]
+
== Genes associated with this reaction  ==
−
* [[RXN-18201]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** 0 associated gene:
+
* Gene: [[Tiso_gene_16918]]
−
** 1 reconstruction source(s) associated:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[annotation-experimental_annotation]]
+
*** Assignment: EC-NUMBER
−
* [[RXN-18202]]
+
* Gene: [[Tiso_gene_14877]]
−
** 1 associated gene(s):
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[Tiso_gene_2920]]
+
*** Assignment: EC-NUMBER
−
** 1 reconstruction source(s) associated:
+
** Source: [[orthology-synechocystis]]
−
*** [[annotation-experimental_annotation]]
+
** Source: [[orthology-esiliculosus]]
−
* [[RXN-18203]]
+
== Pathways  ==
−
** 0 associated gene:
+
* [[PWY-7268]], NAD/NADP-NADH/NADPH cytosolic interconversion (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7268 PWY-7268]
−
** 1 reconstruction source(s) associated:
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
*** [[annotation-experimental_annotation]]
+
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
−
* [[RXN-18204]]
+
** '''14''' reactions found over '''18''' reactions in the full pathway
−
** 1 associated gene(s):
+
* [[RUMP-PWY]], formaldehyde oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY]
−
*** [[Tiso_gene_2920]]
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
** 1 reconstruction source(s) associated:
+
* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch) I: [http://metacyc.org/META/NEW-IMAGE?object=OXIDATIVEPENT-PWY OXIDATIVEPENT-PWY]
−
*** [[annotation-experimental_annotation]]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[RXN-18205]]
+
* [[GLYCOLYSIS-E-D]], superpathway of glycolysis and Entner-Doudoroff: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-E-D GLYCOLYSIS-E-D]
−
** 0 associated gene:
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
** 1 reconstruction source(s) associated:
+
== Reconstruction information  ==
−
*** [[annotation-experimental_annotation]]
+
* Category: [[orthology]]
−
* [[RXN-18206]]
+
** Source: [[orthology-synechocystis]]
−
** 1 associated gene(s):
+
*** Tool: [[pantograph]]
−
*** [[Tiso_gene_2920]]
+
** Source: [[orthology-esiliculosus]]
−
** 1 reconstruction source(s) associated:
+
*** Tool: [[pantograph]]
−
*** [[annotation-experimental_annotation]]
+
* Category: [[manual]]
−
* [[RXN-18207]]
+
** Source: [[manual-primary_network]]
−
** 0 associated gene:
+
* Category: [[annotation]]
−
** 1 reconstruction source(s) associated:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[annotation-experimental_annotation]]
+
*** Tool: [[pathwaytools]]
−
* [[RXN-18208]]
+
−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_2920]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
* [[RXN-18209]]
+
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
== Reaction(s) not found ==
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18184 RXN-18184]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18185 RXN-18185]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18186 RXN-18186]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18187 RXN-18187]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18188 RXN-18188]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18189 RXN-18189]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18190 RXN-18190]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18191 RXN-18191]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18192 RXN-18192]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18193 RXN-18193]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4163 RXNQT-4163]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4166 RXNQT-4166]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4169 RXNQT-4169]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4172 RXNQT-4172]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4175 RXNQT-4175]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4345 RXNQT-4345]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4346 RXNQT-4346]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4347 RXNQT-4347]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4348 RXNQT-4348]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4349 RXNQT-4349]
+
 
== External links  ==
 
== External links  ==
−
* PLANTCYC : PWYQT-4450
+
* RHEA:
−
{{#set: taxonomic range=TAX-3699}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15841 15841]
−
{{#set: common name=aliphatic glucosinolate biosynthesis, side chain elongation cycle}}
+
* LIGAND-RXN:
−
{{#set: common name=methionine elongation}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02736 R02736]
−
{{#set: reaction found=10}}
+
* UNIPROT:
−
{{#set: total reaction=30}}
+
** [http://www.uniprot.org/uniprot/P11411 P11411]
−
{{#set: completion rate=33.0}}
+
** [http://www.uniprot.org/uniprot/P12646 P12646]
 +
** [http://www.uniprot.org/uniprot/Q00612 Q00612]
 +
** [http://www.uniprot.org/uniprot/P54996 P54996]
 +
** [http://www.uniprot.org/uniprot/P21907 P21907]
 +
** [http://www.uniprot.org/uniprot/P54547 P54547]
 +
** [http://www.uniprot.org/uniprot/O51581 O51581]
 +
** [http://www.uniprot.org/uniprot/P0AC53 P0AC53]
 +
** [http://www.uniprot.org/uniprot/P11413 P11413]
 +
** [http://www.uniprot.org/uniprot/P29686 P29686]
 +
** [http://www.uniprot.org/uniprot/P44311 P44311]
 +
** [http://www.uniprot.org/uniprot/P56110 P56110]
 +
** [http://www.uniprot.org/uniprot/Q9JTW0 Q9JTW0]
 +
** [http://www.uniprot.org/uniprot/O25730 O25730]
 +
** [http://www.uniprot.org/uniprot/O51240 O51240]
 +
** [http://www.uniprot.org/uniprot/O66787 O66787]
 +
** [http://www.uniprot.org/uniprot/P05370 P05370]
 +
** [http://www.uniprot.org/uniprot/P11410 P11410]
 +
** [http://www.uniprot.org/uniprot/P11412 P11412]
 +
** [http://www.uniprot.org/uniprot/Q9R5T2 Q9R5T2]
 +
** [http://www.uniprot.org/uniprot/P48828 P48828]
 +
** [http://www.uniprot.org/uniprot/P37986 P37986]
 +
** [http://www.uniprot.org/uniprot/Q8IKU0 Q8IKU0]
 +
** [http://www.uniprot.org/uniprot/Q27741 Q27741]
 +
** [http://www.uniprot.org/uniprot/P48826 P48826]
 +
** [http://www.uniprot.org/uniprot/Q42919 Q42919]
 +
** [http://www.uniprot.org/uniprot/P37830 P37830]
 +
** [http://www.uniprot.org/uniprot/Q9FY99 Q9FY99]
 +
** [http://www.uniprot.org/uniprot/Q49700 Q49700]
 +
** [http://www.uniprot.org/uniprot/P73411 P73411]
 +
** [http://www.uniprot.org/uniprot/Q8L743 Q8L743]
 +
** [http://www.uniprot.org/uniprot/Q43793 Q43793]
 +
** [http://www.uniprot.org/uniprot/O65856 O65856]
 +
** [http://www.uniprot.org/uniprot/Q43839 Q43839]
 +
** [http://www.uniprot.org/uniprot/O81978 O81978]
 +
** [http://www.uniprot.org/uniprot/O24357 O24357]
 +
** [http://www.uniprot.org/uniprot/O24358 O24358]
 +
** [http://www.uniprot.org/uniprot/O24359 O24359]
 +
** [http://www.uniprot.org/uniprot/O22404 O22404]
 +
** [http://www.uniprot.org/uniprot/O22405 O22405]
 +
** [http://www.uniprot.org/uniprot/O22406 O22406]
 +
** [http://www.uniprot.org/uniprot/Q9FJI5 Q9FJI5]
 +
** [http://www.uniprot.org/uniprot/Q9LK23 Q9LK23]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=glucose-6-phosphate_1-dehydrogenase}}
 +
{{#set: ec number=EC-1.1.1.49}}
 +
{{#set: gene associated=Tiso_gene_16918|Tiso_gene_14877}}
 +
{{#set: in pathway=PWY-7268|P122-PWY|RUMP-PWY|OXIDATIVEPENT-PWY|GLYCOLYSIS-E-D}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:47, 21 March 2018

Reaction GLU6PDEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glucose-6-phosphate_1-dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7268, NAD/NADP-NADH/NADPH cytosolic interconversion (yeast): PWY-7268
    • 4 reactions found over 5 reactions in the full pathway
  • P122-PWY, heterolactic fermentation: P122-PWY
    • 14 reactions found over 18 reactions in the full pathway
  • RUMP-PWY, formaldehyde oxidation I: RUMP-PWY
    • 3 reactions found over 6 reactions in the full pathway
  • OXIDATIVEPENT-PWY, pentose phosphate pathway (oxidative branch) I: OXIDATIVEPENT-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • GLYCOLYSIS-E-D, superpathway of glycolysis and Entner-Doudoroff: GLYCOLYSIS-E-D
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GLU6PDEHYDROG-RXN&oldid=43792"