Difference between revisions of "GLUTAMIN-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Deoxy-Ribonucleoside-Triphosphates Deoxy-Ribonucleoside-Triphosphates] == * common name: ** a 2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMIN-RXN GLUTAMIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutaminase ** aspara...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Deoxy-Ribonucleoside-Triphosphates Deoxy-Ribonucleoside-Triphosphates] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMIN-RXN GLUTAMIN-RXN] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** a 2'-deoxyribonucleoside 5'-triphosphate
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** glutaminase
 +
** asparagine_synthetase
 +
** glutamine_amidotransferase
 +
** ferredoxin-dependent_glutamate_synthase
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** ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits
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** carbamoyl_phosphate_synthetase
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** asparagine_synthetase_domaincontaining_protein_putat
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** glutamate_synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.5.1.38 EC-3.5.1.38]
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** [http://enzyme.expasy.org/EC/3.5.1.2 EC-3.5.1.2]
 
* Synonym(s):
 
* Synonym(s):
−
** a deoxynucleoside triphosphate
 
−
** a deoxyribonucleoside triphosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[AMMONIUM]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
−
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
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** 1 L-glutamine[c] '''+''' 1 H2O[c] '''=>''' 1 L-glutamate[c] '''+''' 1 ammonium[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_11511]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_3434]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_17333]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_2973]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_4685]]
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_2581]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_17058]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_7495]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6657]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_1154]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_3435]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_19661]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_1773]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_4975]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_4976]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
* [[GLUTAMINDEG-PWY]], L-glutamine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINDEG-PWY GLUTAMINDEG-PWY]
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** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
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** '''8''' reactions found over '''8''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a 2'-deoxyribonucleoside 5'-triphosphate}}
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* RHEA:
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{{#set: common name=a deoxynucleoside triphosphate|a deoxyribonucleoside triphosphate}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15889 15889]
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{{#set: consumed by=DNA-DIRECTED-DNA-POLYMERASE-RXN}}
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* LIGAND-RXN:
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{{#set: reversible reaction associated=RNA-DIRECTED-DNA-POLYMERASE-RXN}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00256 R00256]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P10172 P10172]
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** [http://www.uniprot.org/uniprot/P28492 P28492]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=glutaminase}}
 +
{{#set: common name=asparagine_synthetase}}
 +
{{#set: common name=glutamine_amidotransferase}}
 +
{{#set: common name=ferredoxin-dependent_glutamate_synthase}}
 +
{{#set: common name=ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits}}
 +
{{#set: common name=carbamoyl_phosphate_synthetase}}
 +
{{#set: common name=asparagine_synthetase_domaincontaining_protein_putat}}
 +
{{#set: common name=glutamate_synthase}}
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{{#set: ec number=EC-3.5.1.38}}
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{{#set: ec number=EC-3.5.1.2}}
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{{#set: gene associated=Tiso_gene_11511|Tiso_gene_3434|Tiso_gene_17333|Tiso_gene_2973|Tiso_gene_4685|Tiso_gene_2581|Tiso_gene_17058|Tiso_gene_7495|Tiso_gene_6657|Tiso_gene_1154|Tiso_gene_3435|Tiso_gene_19661|Tiso_gene_1773|Tiso_gene_4975|Tiso_gene_4976}}
 +
{{#set: in pathway=GLUTAMINDEG-PWY|CITRULBIO-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:48, 21 March 2018

Reaction GLUTAMIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glutaminase
    • asparagine_synthetase
    • glutamine_amidotransferase
    • ferredoxin-dependent_glutamate_synthase
    • ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits
    • carbamoyl_phosphate_synthetase
    • asparagine_synthetase_domaincontaining_protein_putat
    • glutamate_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamine[c] + 1 H2O[c] => 1 L-glutamate[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links









Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GLUTAMIN-RXN&oldid=43854"