Difference between revisions of "Oxidized-Factor-F420"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.5-RXN 3.1.26.5-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** oxidoreductase ** ORF...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Oxidized-Factor-F420 Oxidized-Factor-F420] == * common name: ** an oxidized coenzyme F420 * Syn...")
 
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.5-RXN 3.1.26.5-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Oxidized-Factor-F420 Oxidized-Factor-F420] ==
* direction:
+
** LEFT-TO-RIGHT
+
 
* common name:
 
* common name:
** oxidoreductase
+
** an oxidized coenzyme F420
** ORF
+
* ec number:
+
** [http://enzyme.expasy.org/EC/3.1.26.5 EC-3.1.26.5]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** an oxidized factor F420
  
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
* With identifiers:
+
== Reaction(s) known to produce the compound ==
** 1 [[WATER]][c] '''+''' 1 [[CPD0-2352]][c] '''=>''' 1 [[tRNA-fragment]][c] '''+''' 1 [[CPD0-2353]][c]
+
== Reaction(s) of unknown directionality ==
* With common name(s):
+
* [[COENZYME-F420-HYDROGENASE-RXN]]
** 1 H2O[c] '''+''' 1 a tRNA precursor with a 5' extension and a short 3' extension[c] '''=>''' 1 a tRNA fragment[c] '''+''' 1 a tRNA precursor with a short 3' extension[c]
+
 
+
== Genes associated with this reaction  ==
+
Genes have been associated with this reaction based on different elements listed below.
+
* Gene: [[Tiso_gene_14345]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
+
* Gene: [[Tiso_gene_10972]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
+
* Gene: [[Tiso_gene_3898]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
+
* Gene: [[Tiso_gene_10971]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
+
* Gene: [[Tiso_gene_14344]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
+
== Pathways  ==
+
* [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479]
+
** '''4''' reactions found over '''10''' reactions in the full pathway
+
== Reconstruction information  ==
+
* Category: [[orthology]]
+
** Source: [[orthology-esiliculosus]]
+
*** Tool: [[pantograph]]
+
* Category: [[annotation]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
* UNIPROT:
+
{{#set: common name=an oxidized coenzyme F420}}
** [http://www.uniprot.org/uniprot/Q02773 Q02773]
+
{{#set: common name=an oxidized factor F420}}
** [http://www.uniprot.org/uniprot/P41812 P41812]
+
{{#set: reversible reaction associated=COENZYME-F420-HYDROGENASE-RXN}}
** [http://www.uniprot.org/uniprot/P0A5X8 P0A5X8]
+
** [http://www.uniprot.org/uniprot/P48206 P48206]
+
** [http://www.uniprot.org/uniprot/Q9JW46 Q9JW46]
+
** [http://www.uniprot.org/uniprot/Q9PNX5 Q9PNX5]
+
** [http://www.uniprot.org/uniprot/Q9CJ73 Q9CJ73]
+
** [http://www.uniprot.org/uniprot/P29433 P29433]
+
** [http://www.uniprot.org/uniprot/P25817 P25817]
+
** [http://www.uniprot.org/uniprot/P22835 P22835]
+
** [http://www.uniprot.org/uniprot/P25814 P25814]
+
** [http://www.uniprot.org/uniprot/P0A7Y8 P0A7Y8]
+
** [http://www.uniprot.org/uniprot/Q55005 Q55005]
+
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=oxidoreductase}}
+
{{#set: common name=ORF}}
+
{{#set: ec number=EC-3.1.26.5}}
+
{{#set: gene associated=Tiso_gene_14345|Tiso_gene_10972|Tiso_gene_3898|Tiso_gene_10971|Tiso_gene_14344}}
+
{{#set: in pathway=PWY0-1479}}
+
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:48, 21 March 2018

Metabolite Oxidized-Factor-F420

  • common name:
    • an oxidized coenzyme F420
  • Synonym(s):
    • an oxidized factor F420

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links