Difference between revisions of "ARABCAT-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTONOLACTONE-DEHYDROGENASE-RXN GALACTONOLACTONE-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-R...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARABCAT-PWY ARABCAT-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTONOLACTONE-DEHYDROGENASE-RXN GALACTONOLACTONE-DEHYDROGENASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARABCAT-PWY ARABCAT-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** mitochondrial_l-galactono-_-lactone_dehydrogenase
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** L-arabinose degradation I
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.2.3 EC-1.3.2.3]
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* Synonym(s):
 
* Synonym(s):
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** L-arabinose catabolism
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''3''' reactions in the full pathway
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** 1 [[CPD-330]][c] '''+''' 2 [[Cytochromes-C-Oxidized]][c] '''=>''' 1 [[ASCORBATE]][c] '''+''' 3 [[PROTON]][c] '''+''' 2 [[Cytochromes-C-Reduced]][c]
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* [[RXN0-5116]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 L-galactono-1,4-lactone[c] '''+''' 2 an oxidized c-type cytochrome[c] '''=>''' 1 L-ascorbate[c] '''+''' 3 H+[c] '''+''' 2 a reduced c-type cytochrome[c]
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*** [[Tiso_gene_16670]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* Gene: [[Tiso_gene_210]]
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* [http://metacyc.org/META/NEW-IMAGE?object=ARABISOM-RXN ARABISOM-RXN]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RIBULPEPIM-RXN RIBULPEPIM-RXN]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* ECOCYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R00640 R00640]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=ARABCAT-PWY ARABCAT-PWY]
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* UNIPROT:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/Q9SU56 Q9SU56]
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{{#set: common name=L-arabinose degradation I}}
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** [http://www.uniprot.org/uniprot/O47881 O47881]
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{{#set: common name=L-arabinose catabolism}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=1}}
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{{#set: common name=mitochondrial_l-galactono-_-lactone_dehydrogenase}}
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{{#set: total reaction=3}}
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{{#set: ec number=EC-1.3.2.3}}
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{{#set: completion rate=33.0}}
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{{#set: gene associated=Tiso_gene_210}}
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{{#set: in pathway=PWY-882}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:49, 21 March 2018

Pathway ARABCAT-PWY

  • taxonomic range:
  • common name:
    • L-arabinose degradation I
  • Synonym(s):
    • L-arabinose catabolism

Reaction(s) found

1 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ARABCAT-PWY&oldid=43937"