Difference between revisions of "RXN-9929"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-RIBULOSE D-RIBULOSE] == * smiles: ** C(O)C(O)C(O)C(=O)CO * common name: ** D-ribulose * inchi...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9929 RXN-9929] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-RIBULOSE D-RIBULOSE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9929 RXN-9929] ==
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* smiles:
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* direction:
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** C(O)C(O)C(O)C(=O)CO
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** D-ribulose
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** [http://enzyme.expasy.org/EC/1.3.98.1 EC-1.3.98.1]
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* inchi key:
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** InChIKey=ZAQJHHRNXZUBTE-NQXXGFSBSA-N
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* molecular weight:
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** 150.131   
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* Synonym(s):
 
* Synonym(s):
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** D-erythro-pentulose
 
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** D-erythropentulose
 
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** erythropentulose
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[DI-H-OROTATE]][c] '''+''' 1 [[FUM]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[OROTATE]][c]
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* [[D-RIBULOKIN-RXN]]
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* With common name(s):
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* [[RIBITOL-2-DEHYDROGENASE-RXN]]
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** 1 (S)-dihydroorotate[c] '''+''' 1 fumarate[c] '''=>''' 1 succinate[c] '''+''' 1 orotate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_5280]]
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** Source: [[orthology-synechocystis]]
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== Pathways  ==
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* [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* CAS : 5556-48-9
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30062 30062]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=151261 151261]
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* LIGAND-RXN:
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* HMDB : HMDB00621
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** [http://www.genome.jp/dbget-bin/www_bget?R01867 R01867]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C00309 C00309]
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** [http://www.uniprot.org/uniprot/P74782 P74782]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/Q63707 Q63707]
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** [http://www.chemspider.com/Chemical-Structure.133316.html 133316]
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** [http://www.uniprot.org/uniprot/Q48240 Q48240]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P32746 P32746]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17173 17173]
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** [http://www.uniprot.org/uniprot/Q02127 Q02127]
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* METABOLIGHTS : MTBLC17173
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** [http://www.uniprot.org/uniprot/P32748 P32748]
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{{#set: smiles=C(O)C(O)C(O)C(=O)CO}}
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** [http://www.uniprot.org/uniprot/P28294 P28294]
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{{#set: common name=D-ribulose}}
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** [http://www.uniprot.org/uniprot/P28272 P28272]
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{{#set: inchi key=InChIKey=ZAQJHHRNXZUBTE-NQXXGFSBSA-N}}
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** [http://www.uniprot.org/uniprot/P46539 P46539]
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{{#set: molecular weight=150.131    }}
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** [http://www.uniprot.org/uniprot/Q9CFC9 Q9CFC9]
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{{#set: common name=D-erythro-pentulose|D-erythropentulose|erythropentulose}}
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** [http://www.uniprot.org/uniprot/P25996 P25996]
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{{#set: reversible reaction associated=D-RIBULOKIN-RXN|RIBITOL-2-DEHYDROGENASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q58070 Q58070]
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** [http://www.uniprot.org/uniprot/P0A7E1 P0A7E1]
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** [http://www.uniprot.org/uniprot/Q9JX66 Q9JX66]
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** [http://www.uniprot.org/uniprot/Q9PPB6 Q9PPB6]
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** [http://www.uniprot.org/uniprot/Q9CFW8 Q9CFW8]
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** [http://www.uniprot.org/uniprot/P45477 P45477]
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** [http://www.uniprot.org/uniprot/P32747 P32747]
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** [http://www.uniprot.org/uniprot/P07670 P07670]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.3.98.1}}
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{{#set: gene associated=Tiso_gene_5280}}
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{{#set: in pathway=PWY-7790}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:49, 21 March 2018

Reaction RXN-9929

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-dihydroorotate[c] + 1 fumarate[c] => 1 succinate[c] + 1 orotate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7790, UMP biosynthesis II: PWY-7790
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




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