Difference between revisions of "RXN0-742"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=NADH NADH] == * smiles: ** C1(=C(CC=CN1C5(OC(COP(=O)([O-])OP(=O)([O-])OCC2(OC(C(O)C(O)2)N4(C=NC...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-742 RXN0-742] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....")
 
Line 1: Line 1:
[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=NADH NADH] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-742 RXN0-742] ==
* smiles:
+
* direction:
** C1(=C(CC=CN1C5(OC(COP(=O)([O-])OP(=O)([O-])OCC2(OC(C(O)C(O)2)N4(C=NC3(C(N)=NC=NC=34))))C(O)C(O)5))C(N)=O)
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** LEFT-TO-RIGHT
* common name:
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* ec number:
** NADH
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** [http://enzyme.expasy.org/EC/6.3.4.18 EC-6.3.4.18]
* inchi key:
+
** InChIKey=BOPGDPNILDQYTO-NNYOXOHSSA-L
+
* molecular weight:
+
** 663.43   
+
 
* Synonym(s):
 
* Synonym(s):
** NADH2
 
** dihydrodiphosphopyridine nucleotide
 
** diphosphopyridine nucleotide reduced
 
** dihydronicotinamide adenine dinucleotide
 
** nicotinamide adenine dinucleotide reduced
 
** NAD-reduced
 
** NADH+H+
 
** DPNH
 
** β-NADH
 
  
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
* [[RXN1G-248]]
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* With identifiers:
* [[RXN-9660]]
+
** 1 [[HCO3]][c] '''+''' 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Pi]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[CPD0-181]][c] '''+''' 1 [[ADP]][c]
* [[RXN-11195]]
+
* With common name(s):
* [[RXN1G-1057]]
+
** 1 hydrogencarbonate[c] '''+''' 1 5-amino-1-(5-phospho-β-D-ribosyl)imidazole[c] '''+''' 1 ATP[c] '''=>''' 1 phosphate[c] '''+''' 2 H+[c] '''+''' 1 N5-carboxyaminoimidazole ribonucleotide[c] '''+''' 1 ADP[c]
* [[GLUTAMATE-SYNTHASE-NADH-RXN]]
+
 
* [[RXN1G-679]]
+
== Genes associated with this reaction  ==
* [[GDRm]]
+
Genes have been associated with this reaction based on different elements listed below.
* [[RXN-10062]]
+
* Gene: [[Tiso_gene_16011]]
* [[RXN-5424]]
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** Source: [[orthology-synechocystis]]
* [[RXN-11478]]
+
== Pathways  ==
* [[RXN-8025]]
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* [[PWY-6123]], inosine-5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123]
* [[GDRh]]
+
** '''5''' reactions found over '''6''' reactions in the full pathway
* [[1.5.1.20-RXN]]
+
* [[PWY-7234]], inosine-5'-phosphate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7234 PWY-7234]
* [[RXN1G-509]]
+
** '''4''' reactions found over '''6''' reactions in the full pathway
* [[RXN1G-337]]
+
== Reconstruction information  ==
* [[RXN-3661]]
+
* Category: [[orthology]]
* [[NODOx]]
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** Source: [[orthology-synechocystis]]
* [[RXN3O-4113]]
+
*** Tool: [[pantograph]]
* [[RXN1G-285]]
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* [[R07562]]
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* [[NADHor_2m]]
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* [[ACDHi]]
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* [[RXN1G-488]]
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* [[RXN1G-526]]
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* [[RXN-9659]]
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* [[RXN-9658]]
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* [[RXN-10911]]
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* [[RXN-11482]]
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* [[R4-RXN]]
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* [[RXN-9635]]
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* [[RXN1G-915]]
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* [[ENOYL-ACP-REDUCT-NADH-RXN]]
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* [[RXN1G-196]]
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* [[RXN-12754]]
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* [[RXN1G-37]]
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* [[RXN-10657]]
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* [[RXN-12753]]
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* [[RXN-7694]]
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* [[1.1.1.8-RXN]]
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* [[GLYCERATE-DEHYDROGENASE-RXN]]
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* [[RXN1G-339]]
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* [[RXN0-5330]]
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* [[RXN1G-471]]
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* [[RXN1G-210]]
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* [[GLYCLTD]]
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* [[ALCDHi]]
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* [[RXN-7700]]
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* [[ACDHmi]]
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* [[RXN-7706]]
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* [[ALCDHmi]]
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* [[RXN0-2145]]
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* [[RXN1G-395]]
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* [[RXN1G-299]]
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* [[MTHFO]]
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* [[CYTOCHROME-B5-REDUCTASE-RXN]]
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* [[RXN1G-276]]
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* [[RXN-12997]]
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* [[RXN1G-820]]
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* [[1.6.5.4-RXN]]
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* [[4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN]]
+
* [[RXN1G-686]]
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* [[RXN1G-396]]
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* [[RXN-9662]]
+
* [[RXN-9663]]
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* [[GDR]]
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* [[RXN-9661]]
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* [[RXN1G-1325]]
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* [[RXN1G-468]]
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* [[RXN-9558]]
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* [[RXN1G-607]]
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* [[RXN1G-171]]
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* [[RXN-12570]]
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* [[RXN1G-962]]
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* [[RXN-9657]]
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* [[RXN1G-1130]]
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* [[RXN1G-1117]]
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* [[RXN-10661]]
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* [[NITRATE-REDUCTASE-NADH-RXN]]
+
* [[RXN1G-193]]
+
* [[RXN-8026]]
+
* [[RXN-10781]]
+
* [[RXN-13417]]
+
== Reaction(s) known to produce the compound ==
+
* [[RXN-905]]
+
* [[RXN-12490]]
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* [[RXN66-476-CPD-388/NAD/WATER//CPD-8462/NADH/PROTON.40.]]
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* [[RXN66-476-CPD-14719/NAD/WATER//CPD-7830/NADH/PROTON.42.]]
+
* [[1.1.1.39-RXN]]
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* [[PREPHENATEDEHYDROG-RXN]]
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* [[ALDDH]]
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* [[RXN-11213]]
+
* [[1.5.1.7-RXN]]
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* [[RXN-13158]]
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* [[RXN-12789]]
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* [[3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN]]
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* [[PYRIDOXAL-4-DEHYDROGENASE-RXN]]
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* [[R222-RXN]]
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* [[RXN-13414]]
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* [[RXN-12705]]
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* [[RXN-8001]]
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* [[RXN-14249]]
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* [[RXN-17115]]
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* [[RXN66-3]]
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* [[ALDH_im4ac]]
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* [[AMINOBUTDEHYDROG-RXN]]
+
* [[RXN-14393]]
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* [[RXN-1884]]
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* [[HISTALDEHYD-RXN]]
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* [[RXN66-353]]
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* [[DHBDEHYD-RXN]]
+
* [[RXNQT-4178]]
+
* [[1.2.1.25-RXN]]
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* [[RXN-10089]]
+
* [[ALDHDEHYDROG-RXN]]
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* [[2-KETO-ADIPATE-DEHYDROG-RXN]]
+
* [[RXN-8162]]
+
* [[RXN-17777]]
+
* [[IMDH]]
+
* [[PYRUVDEH-RXN]]
+
* [[RXN-11245]]
+
* [[RXN-10715]]
+
* [[RXNQT-4174]]
+
* [[THREODEHYD-RXN]]
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* [[HBCO]]
+
* [[RXNQT-4171]]
+
* [[RXN-2902]]
+
* [[1.2.1.65-RXN]]
+
* [[RXN-12750]]
+
* [[2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN]]
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* [[GLYCOLALD-DEHYDROG-RXN]]
+
* [[RXN-37]]
+
* [[RXN66-479]]
+
* [[OHACYL-COA-DEHYDROG-RXN]]
+
* [[RXN66-472]]
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* [[RXN66-476]]
+
* [[RXN-16559]]
+
* [[UDPGALor]]
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* [[RXN-17786]]
+
* [[RXN-17781]]
+
* [[1.5.1.9-RXN]]
+
* [[RXNQT-4168]]
+
* [[RXN-10702]]
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* [[RXN-10703]]
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* [[RXNQT-4165]]
+
* [[1.2.1.27-RXN]]
+
* [[RXN0-1132]]
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* [[R00476]]
+
* [[RXN-10780]]
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* [[RXN-12693]]
+
* [[RXN-14116]]
+
* [[RXN-12581]]
+
* [[RXN-7682]]
+
* [[RXN-17794]]
+
* [[RXN66-478]]
+
* [[RXN-17790]]
+
* [[PYRROLINECARBDEHYDROG-RXN]]
+
* [[1.8.1.4-RXN]]
+
* [[RXN-17798]]
+
* [[QUINATE-5-DEHYDROGENASE-RXN]]
+
* [[RXN66-342]]
+
* [[BNorh]]
+
* [[RXN-12507]]
+
* [[ALDDHm]]
+
* [[RXN-14271]]
+
* [[DIMETHUROPORDEHYDROG-RXN]]
+
* [[RXN-14275]]
+
* [[SSNOm]]
+
* [[RXN-7745]]
+
* [[RXN-10698]]
+
* [[RXN-16136]]
+
* [[SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
+
* [[RXN-14986]]
+
* [[BNor]]
+
* [[RXN0-5248]]
+
== Reaction(s) of unknown directionality ==
+
* [[1.1.1.255-RXN]]
+
* [[HMNOS]]
+
* [[MANNPDEHYDROG-RXN]]
+
* [[RXN-161]]
+
* [[RXN-7719]]
+
* [[ALLYSINE-DEHYDROG-RXN]]
+
* [[PHENDEHYD-RXN]]
+
* [[RXN-18206]]
+
* [[D-THREO-ALDOSE-1-DEHYDROGENASE-RXN]]
+
* [[NADH-DEHYDROG-A-RXN]]
+
* [[RXN-7716]]
+
* [[RXN0-5289]]
+
* [[1.1.1.211-RXN]]
+
* [[RXN0-2044]]
+
* [[RXN-18202]]
+
* [[IMP-DEHYDROG-RXN]]
+
* [[RETINOL-DEHYDROGENASE-RXN]]
+
* [[BCor]]
+
* [[GLYCOLATE-REDUCTASE-RXN]]
+
* [[RXN-18208]]
+
* [[RXN66-350]]
+
* [[RR-BUTANEDIOL-DEHYDROGENASE-RXN]]
+
* [[HYDROXYPYRROLINEDEH-RXN]]
+
* [[NADH-DEHYDROGENASE-RXN]]
+
* [[RXN-8629]]
+
* [[RXN-12448]]
+
* [[RXN-11662]]
+
* [[RIBITOL-2-DEHYDROGENASE-RXN]]
+
* [[ALCOHOL-DEHYDROG-GENERIC-RXN]]
+
* [[L-IDITOL-2-DEHYDROGENASE-RXN]]
+
* [[RXN-10915]]
+
* [[GLUTAMATE-DEHYDROGENASE-RXN]]
+
* [[ALCD19]]
+
* [[HISTOLDEHYD-RXN]]
+
* [[HACD5m]]
+
* [[MALATE-DEH-RXN]]
+
* [[2KETO-3METHYLVALERATE-RXN]]
+
* [[RXN-18200]]
+
* [[RXN-7657]]
+
* [[RXN-7644]]
+
* [[ALCOHOL-DEHYDROG-RXN]]
+
* [[RXN0-901]]
+
* [[RXN-14102]]
+
* [[HBNOm]]
+
* [[RXN-1302]]
+
* [[RXN-7693]]
+
* [[D-LACTALDEHYDE-DEHYDROGENASE-RXN]]
+
* [[3-ISOPROPYLMALDEHYDROG-RXN]]
+
* [[BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN]]
+
* [[GLYCINE-DEHYDROGENASE-RXN]]
+
* [[1.1.1.145-RXN]]
+
* [[3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN]]
+
* [[BADH-RXN]]
+
* [[RXN-16133]]
+
* [[RXN-18204]]
+
* [[GAPOXNPHOSPHN-RXN]]
+
* [[RXN-13671]]
+
* [[FUMARATE-REDUCTASE-NADH-RXN]]
+
* [[PGLYCDEHYDROG-RXN]]
+
* [[HACD5]]
+
* [[RXN-12332]]
+
* [[1.3.1.9-RXN]]
+
* [[RXN0-276]]
+
* [[RXN-18210]]
+
* [[RME297]]
+
* [[MYO-INOSITOL-2-DEHYDROGENASE-RXN]]
+
* [[RXN-14225]]
+
* [[RXN-14224]]
+
* [[RXN-13198]]
+
* [[R01752]]
+
* [[ACETALD-DEHYDROG-RXN]]
+
* [[RXN-14280]]
+
 
== External links  ==
 
== External links  ==
* CAS : 58-68-4
+
* RHEA:
* BIGG : nadh
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19317 19317]
* PUBCHEM:
+
* LIGAND-RXN:
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=21604869 21604869]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07404 R07404]
* HMDB : HMDB01487
+
{{#set: direction=LEFT-TO-RIGHT}}
* LIGAND-CPD:
+
{{#set: ec number=EC-6.3.4.18}}
** [http://www.genome.jp/dbget-bin/www_bget?C00004 C00004]
+
{{#set: gene associated=Tiso_gene_16011}}
* CHEMSPIDER:
+
{{#set: in pathway=PWY-6123|PWY-7234}}
** [http://www.chemspider.com/Chemical-Structure.10239197.html 10239197]
+
{{#set: reconstruction category=orthology}}
* CHEBI:
+
{{#set: reconstruction source=orthology-synechocystis}}
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57945 57945]
+
{{#set: reconstruction tool=pantograph}}
* METABOLIGHTS : MTBLC57945
+
{{#set: smiles=C1(=C(CC=CN1C5(OC(COP(=O)([O-])OP(=O)([O-])OCC2(OC(C(O)C(O)2)N4(C=NC3(C(N)=NC=NC=34))))C(O)C(O)5))C(N)=O)}}
+
{{#set: common name=NADH}}
+
{{#set: inchi key=InChIKey=BOPGDPNILDQYTO-NNYOXOHSSA-L}}
+
{{#set: molecular weight=663.43    }}
+
{{#set: common name=NADH2|dihydrodiphosphopyridine nucleotide|diphosphopyridine nucleotide reduced|dihydronicotinamide adenine dinucleotide|nicotinamide adenine dinucleotide reduced|NAD-reduced|NADH+H+|DPNH|β-NADH}}
+
{{#set: consumed by=RXN1G-248|RXN-9660|RXN-11195|RXN1G-1057|GLUTAMATE-SYNTHASE-NADH-RXN|RXN1G-679|GDRm|RXN-10062|RXN-5424|RXN-11478|RXN-8025|GDRh|1.5.1.20-RXN|RXN1G-509|RXN1G-337|RXN-3661|NODOx|RXN3O-4113|RXN1G-285|R07562|NADHor_2m|ACDHi|RXN1G-488|RXN1G-526|RXN-9659|RXN-9658|RXN-10911|RXN-11482|R4-RXN|RXN-9635|RXN1G-915|ENOYL-ACP-REDUCT-NADH-RXN|RXN1G-196|RXN-12754|RXN1G-37|RXN-10657|RXN-12753|RXN-7694|1.1.1.8-RXN|GLYCERATE-DEHYDROGENASE-RXN|RXN1G-339|RXN0-5330|RXN1G-471|RXN1G-210|GLYCLTD|ALCDHi|RXN-7700|ACDHmi|RXN-7706|ALCDHmi|RXN0-2145|RXN1G-395|RXN1G-299|MTHFO|CYTOCHROME-B5-REDUCTASE-RXN|RXN1G-276|RXN-12997|RXN1G-820|1.6.5.4-RXN|4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN|RXN1G-686|RXN1G-396|RXN-9662|RXN-9663|GDR|RXN-9661|RXN1G-1325|RXN1G-468|RXN-9558|RXN1G-607|RXN1G-171|RXN-12570|RXN1G-962|RXN-9657|RXN1G-1130|RXN1G-1117|RXN-10661|NITRATE-REDUCTASE-NADH-RXN|RXN1G-193|RXN-8026|RXN-10781|RXN-13417}}
+
{{#set: produced by=RXN-905|RXN-12490|RXN66-476-CPD-388/NAD/WATER//CPD-8462/NADH/PROTON.40.|RXN66-476-CPD-14719/NAD/WATER//CPD-7830/NADH/PROTON.42.|1.1.1.39-RXN|PREPHENATEDEHYDROG-RXN|ALDDH|RXN-11213|1.5.1.7-RXN|RXN-13158|RXN-12789|3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN|PYRIDOXAL-4-DEHYDROGENASE-RXN|R222-RXN|RXN-13414|RXN-12705|RXN-8001|RXN-14249|RXN-17115|RXN66-3|ALDH_im4ac|AMINOBUTDEHYDROG-RXN|RXN-14393|RXN-1884|HISTALDEHYD-RXN|RXN66-353|DHBDEHYD-RXN|RXNQT-4178|1.2.1.25-RXN|RXN-10089|ALDHDEHYDROG-RXN|2-KETO-ADIPATE-DEHYDROG-RXN|RXN-8162|RXN-17777|IMDH|PYRUVDEH-RXN|RXN-11245|RXN-10715|RXNQT-4174|THREODEHYD-RXN|HBCO|RXNQT-4171|RXN-2902|1.2.1.65-RXN|RXN-12750|2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN|GLYCOLALD-DEHYDROG-RXN|RXN-37|RXN66-479|OHACYL-COA-DEHYDROG-RXN|RXN66-472|RXN66-476|RXN-16559|UDPGALor|RXN-17786|RXN-17781|1.5.1.9-RXN|RXNQT-4168|RXN-10702|RXN-10703|RXNQT-4165|1.2.1.27-RXN|RXN0-1132|R00476|RXN-10780|RXN-12693|RXN-14116|RXN-12581|RXN-7682|RXN-17794|RXN66-478|RXN-17790|PYRROLINECARBDEHYDROG-RXN|1.8.1.4-RXN|RXN-17798|QUINATE-5-DEHYDROGENASE-RXN|RXN66-342|BNorh|RXN-12507|ALDDHm|RXN-14271|DIMETHUROPORDEHYDROG-RXN|RXN-14275|SSNOm|RXN-7745|RXN-10698|RXN-16136|SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN|RXN-14986|BNor|RXN0-5248}}
+
{{#set: reversible reaction associated=1.1.1.255-RXN|HMNOS|MANNPDEHYDROG-RXN|RXN-161|RXN-7719|ALLYSINE-DEHYDROG-RXN|PHENDEHYD-RXN|RXN-18206|D-THREO-ALDOSE-1-DEHYDROGENASE-RXN|NADH-DEHYDROG-A-RXN|RXN-7716|RXN0-5289|1.1.1.211-RXN|RXN0-2044|RXN-18202|IMP-DEHYDROG-RXN|RETINOL-DEHYDROGENASE-RXN|BCor|GLYCOLATE-REDUCTASE-RXN|RXN-18208|RXN66-350|RR-BUTANEDIOL-DEHYDROGENASE-RXN|HYDROXYPYRROLINEDEH-RXN|NADH-DEHYDROGENASE-RXN|RXN-8629|RXN-12448|RXN-11662|RIBITOL-2-DEHYDROGENASE-RXN|ALCOHOL-DEHYDROG-GENERIC-RXN|L-IDITOL-2-DEHYDROGENASE-RXN|RXN-10915|GLUTAMATE-DEHYDROGENASE-RXN|ALCD19|HISTOLDEHYD-RXN|HACD5m|MALATE-DEH-RXN|2KETO-3METHYLVALERATE-RXN|RXN-18200|RXN-7657|RXN-7644|ALCOHOL-DEHYDROG-RXN|RXN0-901|RXN-14102|HBNOm|RXN-1302|RXN-7693|D-LACTALDEHYDE-DEHYDROGENASE-RXN|3-ISOPROPYLMALDEHYDROG-RXN|BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN|GLYCINE-DEHYDROGENASE-RXN|1.1.1.145-RXN|3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN|BADH-RXN|RXN-16133|RXN-18204|GAPOXNPHOSPHN-RXN|RXN-13671|FUMARATE-REDUCTASE-NADH-RXN|PGLYCDEHYDROG-RXN|HACD5|RXN-12332|1.3.1.9-RXN|RXN0-276|RXN-18210|RME297|MYO-INOSITOL-2-DEHYDROGENASE-RXN|RXN-14225|RXN-14224|RXN-13198|R01752|ACETALD-DEHYDROG-RXN|RXN-14280}}
+

Latest revision as of 20:49, 21 March 2018

Reaction RXN0-742

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 hydrogencarbonate[c] + 1 5-amino-1-(5-phospho-β-D-ribosyl)imidazole[c] + 1 ATP[c] => 1 phosphate[c] + 2 H+[c] + 1 N5-carboxyaminoimidazole ribonucleotide[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6123, inosine-5'-phosphate biosynthesis I: PWY-6123
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7234, inosine-5'-phosphate biosynthesis III: PWY-7234
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links