Difference between revisions of "Tiso gene 1602"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16139 RXN-16139] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** abhydrolase_domain-c...")
(Created page with "Category:Gene == Gene Tiso_gene_1602 == * right end position: ** 5271 * transcription direction: ** POSITIVE * left end position: ** 21 * centisome position: ** 9.11972900...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16139 RXN-16139] ==
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== Gene Tiso_gene_1602 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5271
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* common name:
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* transcription direction:
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** ORF
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** POSITIVE
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** abhydrolase_domain-containing_protein_4-like
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* left end position:
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* ec number:
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** 21
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** [http://enzyme.expasy.org/EC/3.1.1.4 EC-3.1.1.4]
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* centisome position:
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** 9.11972900e-2
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[HOMOCYSMET-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-17282]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Glycerolipids]][c] '''+''' 1 [[5Z8Z11Z14Z17Z-EICOSAPENTAENOATE]][c]
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** Source: [[annotation-experimental_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 H2O[c] '''+''' 1 a [glycerolipid]-icosapentaenoate[c] '''=>''' 1 H+[c] '''+''' 1 a glycerolipid[c] '''+''' 1 icosapentaenoate[c]
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* Reaction: [[HOMOCYSMETB12-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_12960]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_15047]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_12959]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_15046]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY66-394]], aspirin triggered resolvin E biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-394 PWY66-394]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[R00946]]
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** Source: [[orthology-synechocystis]]
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== Pathways associated ==
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* [[PWY-3841]]
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* [[ADENOSYLHOMOCYSCAT-PWY]]
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* [[PWY-702]]
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* [[PWY-2201]]
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* [[HOMOSER-METSYN-PWY]]
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* [[HSERMETANA-PWY]]
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* [[PWY-5041]]
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* [[1CMET2-PWY]]
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* [[PWY-6151]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5271}}
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{{#set: common name=ORF}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=abhydrolase_domain-containing_protein_4-like}}
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{{#set: left end position=21}}
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{{#set: ec number=EC-3.1.1.4}}
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{{#set: centisome position=9.11972900e-2}}
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{{#set: gene associated=Tiso_gene_12960|Tiso_gene_15047|Tiso_gene_12959|Tiso_gene_15046}}
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{{#set: reaction associated=HOMOCYSMET-RXN|HOMOCYSMETB12-RXN|R00946}}
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{{#set: in pathway=PWY66-394}}
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{{#set: pathway associated=PWY-3841|ADENOSYLHOMOCYSCAT-PWY|PWY-702|PWY-2201|HOMOSER-METSYN-PWY|HSERMETANA-PWY|PWY-5041|1CMET2-PWY|PWY-6151}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:51, 21 March 2018

Gene Tiso_gene_1602

  • right end position:
    • 5271
  • transcription direction:
    • POSITIVE
  • left end position:
    • 21
  • centisome position:
    • 9.11972900e-2
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1602&oldid=44207"