Difference between revisions of "G5DH"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.58-RXN 4.2.1.58-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** (3R)-3-hydroxybutanoy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=G5DH G5DH] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamate-5-semialdehyde dehydrogenas...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.58-RXN 4.2.1.58-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=G5DH G5DH] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase
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** glutamate-5-semialdehyde dehydrogenase
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** polyketide_synthase
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−
* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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−
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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* Synonym(s):
 
* Synonym(s):
−
** crotonoyl-[acyl-carrier-protein] hydratase
 
−
** β-hydroxybutyryl acyl carrier protein (ACP) dehydrase
 
−
** β-hydroxybutyryl acyl carrier protein dehydrase
 
−
** enoyl acyl carrier protein hydrase
 
−
** crotonyl acyl carrier protein hydratase
 
−
** 3-hydroxybutyryl acyl carrier protein dehydratase
 
−
** β-hydroxybutyryl acyl carrier  protein dehydrase
 
−
** (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)
 
−
** (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Beta-3-hydroxybutyryl-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[Crotonyl-ACPs]][c]
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** 1.0 [[NADPH]][c] '''+''' 1.0 [[PROTON]][c] '''+''' 1.0 [[L-GLUTAMATE-5-P]][c] '''=>''' 1.0 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] '''+''' 1.0 [[NADP]][c] '''+''' 1.0 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a (3R)-3-hydroxybutanoyl-[acp][c] '''=>''' 1 H2O[c] '''+''' 1 a crotonyl-[acp][c]
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** 1.0 NADPH[c] '''+''' 1.0 H+[c] '''+''' 1.0 γ-L-glutamyl 5-phosphate[c] '''=>''' 1.0 L-glutamate-5-semialdehyde[c] '''+''' 1.0 NADP+[c] '''+''' 1.0 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_13394]]
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* Gene: [[Tiso_gene_16634]]
−
** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-creinhardtii]]
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*** Assignment: EC-NUMBER
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−
* Gene: [[Tiso_gene_6884]]
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−
** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: AUTOMATED-NAME-MATCH
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−
* Gene: [[Tiso_gene_136]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: EC-NUMBER
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−
* Gene: [[Tiso_gene_10876]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: EC-NUMBER
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−
* Gene: [[Tiso_gene_500]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: EC-NUMBER
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−
* Gene: [[Tiso_gene_135]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
 
−
** '''31''' reactions found over '''31''' reactions in the full pathway
 
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
 
−
** '''31''' reactions found over '''31''' reactions in the full pathway
 
−
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[manual]]
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* Category: [[orthology]]
−
** Source: [[manual-primary_network]]
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** Source: [[orthology-creinhardtii]]
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* Category: [[annotation]]
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*** Tool: [[pantograph]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Tool: [[pathwaytools]]
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−
** Source: [[annotation-experimental_annotation]]
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−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04428 R04428]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase}}
+
{{#set: common name=glutamate-5-semialdehyde dehydrogenase}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: gene associated=Tiso_gene_16634}}
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: in pathway=}}
−
{{#set: ec number=EC-2.3.1.85}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: ec number=EC-4.2.1.59}}
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{{#set: reconstruction source=orthology-creinhardtii}}
−
{{#set: common name=crotonoyl-[acyl-carrier-protein] hydratase|β-hydroxybutyryl acyl carrier protein (ACP) dehydrase|β-hydroxybutyryl acyl carrier protein dehydrase|enoyl acyl carrier protein hydrase|crotonyl acyl carrier protein hydratase|3-hydroxybutyryl acyl carrier protein dehydratase|β-hydroxybutyryl acyl carrier  protein dehydrase|(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)|(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: gene associated=Tiso_gene_13394|Tiso_gene_6884|Tiso_gene_136|Tiso_gene_10876|Tiso_gene_500|Tiso_gene_135}}
+
−
{{#set: in pathway=PWY-5971|PWY-5994|PWY-7388}}
+
−
{{#set: reconstruction category=manual|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:52, 21 March 2018

Reaction G5DH

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glutamate-5-semialdehyde dehydrogenase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=G5DH&oldid=44287"