Difference between revisions of "RXN-10059"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10658 RXN-10658] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase * ec num...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10059 RXN-10059] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase * ec num...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10059 RXN-10059] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| Line 11: | Line 11: | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[Lignoceroyl-ACPs]][c] '''=>''' 1 [[3-oxo-cerotoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 H+[c] '''+''' 1 malonyl-CoA[c] '''+''' 1 a lignoceroyl-[acp][c] '''=>''' 1 a 3-oxo-cerotoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 coenzyme A[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[Tiso_gene_15991]] |
** Source: [[orthology-esiliculosus]] | ** Source: [[orthology-esiliculosus]] | ||
* Gene: [[Tiso_gene_19302]] | * Gene: [[Tiso_gene_19302]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_14485]] | ||
** Source: [[orthology-esiliculosus]] | ** Source: [[orthology-esiliculosus]] | ||
* Gene: [[Tiso_gene_5939]] | * Gene: [[Tiso_gene_5939]] | ||
| Line 26: | Line 28: | ||
** Source: [[annotation-experimental_annotation]] | ** Source: [[annotation-experimental_annotation]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
| − | |||
== Pathways == | == Pathways == | ||
| − | * [[PWY- | + | * [[PWY-6113]], superpathway of mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6113 PWY-6113] |
| − | ** ''' | + | ** '''8''' reactions found over '''12''' reactions in the full pathway |
| + | * [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321] | ||
| + | ** '''86''' reactions found over '''182''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 44: | Line 46: | ||
{{#set: common name=3-oxoacyl-synthase}} | {{#set: common name=3-oxoacyl-synthase}} | ||
{{#set: ec number=EC-2.3.1.41}} | {{#set: ec number=EC-2.3.1.41}} | ||
| − | {{#set: gene associated= | + | {{#set: gene associated=Tiso_gene_15991|Tiso_gene_19302|Tiso_gene_14485|Tiso_gene_5939}} |
| − | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-6113|PWYG-321}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}} | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 20:54, 21 March 2018
Contents
Reaction RXN-10059
- direction:
- LEFT-TO-RIGHT
- common name:
- 3-oxoacyl-synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 MALONYL-COA[c] + 1 Lignoceroyl-ACPs[c] => 1 3-oxo-cerotoyl-ACPs[c] + 1 CARBON-DIOXIDE[c] + 1 CO-A[c]
- With common name(s):
- 1 H+[c] + 1 malonyl-CoA[c] + 1 a lignoceroyl-[acp][c] => 1 a 3-oxo-cerotoyl-[acp][c] + 1 CO2[c] + 1 coenzyme A[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_15991
- Source: orthology-esiliculosus
- Gene: Tiso_gene_19302
- Source: orthology-esiliculosus
- Gene: Tiso_gene_14485
- Source: orthology-esiliculosus
- Gene: Tiso_gene_5939
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY-6113, superpathway of mycolate biosynthesis: PWY-6113
- 8 reactions found over 12 reactions in the full pathway
- PWYG-321, mycolate biosynthesis: PWYG-321
- 86 reactions found over 182 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
