Difference between revisions of "Tiso gene 6679"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URACIL-PRIBOSYLTRANS-RXN URACIL-PRIBOSYLTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Gene == Gene Tiso_gene_6679 == * right end position: ** 3307 * transcription direction: ** POSITIVE * left end position: ** 1527 * centisome position: ** 6.608959...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URACIL-PRIBOSYLTRANS-RXN URACIL-PRIBOSYLTRANS-RXN] ==
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== Gene Tiso_gene_6679 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3307
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* common name:
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* transcription direction:
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** uracil_phosphoribosyltransferase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.4.2.9 EC-2.4.2.9]
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** 1527
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* centisome position:
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** 6.608959   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GLUTATHIONE-PEROXIDASE-RXN]]
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** 1 [[URACIL]][c] '''+''' 1 [[PRPP]][c] '''=>''' 1 [[UMP]][c] '''+''' 1 [[PPI]][c]
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* With common name(s):
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** 1 uracil[c] '''+''' 1 5-phospho-α-D-ribose 1-diphosphate[c] '''=>''' 1 UMP[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_10462]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_14867]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-7183]], pyrimidine nucleobases salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7183 PWY-7183]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[DETOX1-PWY-1]]
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* [[PWY-4081]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3307}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13017 13017]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=1527}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00966 R00966]
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{{#set: centisome position=6.608959    }}
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* UNIPROT:
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{{#set: reaction associated=GLUTATHIONE-PEROXIDASE-RXN}}
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** [http://www.uniprot.org/uniprot/P0A8F0 P0A8F0]
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{{#set: pathway associated=DETOX1-PWY-1|PWY-4081}}
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** [http://www.uniprot.org/uniprot/P39765 P39765]
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** [http://www.uniprot.org/uniprot/Q9CEC9 Q9CEC9]
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** [http://www.uniprot.org/uniprot/P47276 P47276]
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** [http://www.uniprot.org/uniprot/O27186 O27186]
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** [http://www.uniprot.org/uniprot/P43857 P43857]
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** [http://www.uniprot.org/uniprot/O67914 O67914]
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** [http://www.uniprot.org/uniprot/P44722 P44722]
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** [http://www.uniprot.org/uniprot/Q9PN13 Q9PN13]
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** [http://www.uniprot.org/uniprot/P65941 P65941]
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** [http://www.uniprot.org/uniprot/P39149 P39149]
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** [http://www.uniprot.org/uniprot/P18562 P18562]
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** [http://www.uniprot.org/uniprot/P41007 P41007]
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** [http://www.uniprot.org/uniprot/P72753 P72753]
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** [http://www.uniprot.org/uniprot/Q55758 Q55758]
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** [http://www.uniprot.org/uniprot/P93394 P93394]
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** [http://www.uniprot.org/uniprot/O65583 O65583]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=uracil_phosphoribosyltransferase}}
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{{#set: ec number=EC-2.4.2.9}}
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{{#set: gene associated=Tiso_gene_10462|Tiso_gene_14867}}
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{{#set: in pathway=PWY-7183}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:55, 21 March 2018

Gene Tiso_gene_6679

  • right end position:
    • 3307
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1527
  • centisome position:
    • 6.608959
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6679&oldid=44590"