Difference between revisions of "Tiso gene 13099"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.2.1.34-RXN 6.2.1.34-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Gene == Gene Tiso_gene_13099 == * right end position: ** 6289 * transcription direction: ** NEGATIVE * left end position: ** 1012 * centisome position: ** 15.4929...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.2.1.34-RXN 6.2.1.34-RXN] ==
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== Gene Tiso_gene_13099 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6289
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/6.2.1.34 EC-6.2.1.34]
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** NEGATIVE
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* left end position:
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** 1012
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* centisome position:
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** 15.492958   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[FERULIC-ACID]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[FERULOYL-COA]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 ferulate[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 feruloyl-CoA[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_12275]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_14183]]
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* [[PWY-6343]], ferulate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6343 PWY-6343]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
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** '''9''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=6289}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02194 R02194]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=1012}}
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{{#set: ec number=EC-6.2.1.34}}
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{{#set: centisome position=15.492958    }}
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{{#set: gene associated=Tiso_gene_12275|Tiso_gene_14183}}
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{{#set: reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN}}
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{{#set: in pathway=PWY-6343|PWY-1121}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:56, 21 March 2018

Gene Tiso_gene_13099

  • right end position:
    • 6289
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 1012
  • centisome position:
    • 15.492958
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13099&oldid=44709"