Difference between revisions of "Tiso gene 15942"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-169 RXN1F-169] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_15942 == * right end position: ** 2192 * transcription direction: ** POSITIVE * left end position: ** 249 * centisome position: ** 5.310301...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-169 RXN1F-169] ==
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== Gene Tiso_gene_15942 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2192
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
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** POSITIVE
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* left end position:
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** 249
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* centisome position:
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** 5.310301   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DIHYDROFOLATESYNTH-RXN]]
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-96]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD1F-140]][c] '''+''' 2 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''+''' 1 gibberellin A19[c] '''=>''' 1 H+[c] '''+''' 1 gibberellin A20[c] '''+''' 2 CO2[c] '''+''' 1 succinate[c]
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* Reaction: [[FOLYLPOLYGLUTAMATESYNTH-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[FORMYLTHFGLUSYNTH-RXN]]
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* Gene: [[Tiso_gene_3330]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-6341]]
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* [[PWY-5035]], gibberellin biosynthesis III (early C-13 hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5035 PWY-5035]
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** Source: [[annotation-in-silico_annotation]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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*** Assignment: ec-number
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== Reconstruction information  ==
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* Reaction: [[RXN0-2921]]
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* Category: [[orthology]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** Assignment: ec-number
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* [[PWY-2161]]
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* [[PWY-6614]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=2192}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03807 R03807]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=249}}
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{{#set: ec number=EC-1.14.11}}
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{{#set: centisome position=5.310301    }}
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{{#set: gene associated=Tiso_gene_3330}}
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{{#set: reaction associated=DIHYDROFOLATESYNTH-RXN|FOLYLPOLYGLUTAMATESYNTH-RXN|FORMYLTHFGLUSYNTH-RXN|RXN-6341|RXN0-2921}}
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{{#set: in pathway=PWY-5035}}
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{{#set: pathway associated=PWY-2161|PWY-6614}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:57, 21 March 2018

Gene Tiso_gene_15942

  • right end position:
    • 2192
  • transcription direction:
    • POSITIVE
  • left end position:
    • 249
  • centisome position:
    • 5.310301
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_15942&oldid=44852"