Difference between revisions of "RXN-10702"

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(Created page with "Category:Gene == Gene Tiso_gene_9874 == * right end position: ** 5787 * transcription direction: ** POSITIVE * left end position: ** 3470 * centisome position: ** 38.54699...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10702 RXN-10702] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-_dehydrogenas...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_9874 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10702 RXN-10702] ==
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* right end position:
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* direction:
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** 5787
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** 3-hydroxyacyl-_dehydrogenase
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* left end position:
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** hydroxyacyl-coenzyme_a_mitochondrial
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** 3470
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** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
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* centisome position:
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* ec number:
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** 38.54699   
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[NADH-DEHYDROG-A-RXN]]
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* With identifiers:
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** 1 [[NAD]][c] '''+''' 1 [[CPD-11523]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[CPD-11524]][c] '''+''' 1 [[PROTON]][c]
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* With common name(s):
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** 1 NAD+[c] '''+''' 1 OPC6-3-hydroxyacyl-CoA[c] '''=>''' 1 NADH[c] '''+''' 1 OPC6-3-ketoacyl-CoA[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_18838]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5857]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
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== Pathways associated ==
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** Source: [[orthology-esiliculosus]]
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* [[PWY-6692]]
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* Gene: [[Tiso_gene_18839]]
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* [[PWY-3781]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-5083]]
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*** Assignment: EC-NUMBER
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* [[PWY0-1334]]
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* Gene: [[Tiso_gene_14027]]
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* [[PWY0-1335]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-4302]]
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* Gene: [[Tiso_gene_14026]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_14262]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
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** '''15''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: right end position=5787}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
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{{#set: left end position=3470}}
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{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
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{{#set: centisome position=38.54699    }}
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{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
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{{#set: reaction associated=NADH-DEHYDROG-A-RXN}}
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{{#set: ec number=EC-1.1.1.35}}
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{{#set: pathway associated=PWY-6692|PWY-3781|PWY-5083|PWY0-1334|PWY0-1335|PWY-4302}}
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{{#set: gene associated=Tiso_gene_18838|Tiso_gene_5857|Tiso_gene_18839|Tiso_gene_14027|Tiso_gene_14026|Tiso_gene_14262}}
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{{#set: in pathway=PWY-735}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:00, 21 March 2018

Reaction RXN-10702

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-hydroxyacyl-_dehydrogenase
    • hydroxyacyl-coenzyme_a_mitochondrial
    • hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 OPC6-3-hydroxyacyl-CoA[c] => 1 NADH[c] + 1 OPC6-3-ketoacyl-CoA[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 15 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10702&oldid=45185"