Difference between revisions of "Tiso gene 12280"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.48-RXN 3.2.1.48-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** sphingomyelinase * ec...")
(Created page with "Category:Gene == Gene Tiso_gene_12280 == * right end position: ** 3075 * transcription direction: ** POSITIVE * left end position: ** 25 * centisome position: ** 0.3482379...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.48-RXN 3.2.1.48-RXN] ==
+
== Gene Tiso_gene_12280 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 3075
−
* common name:
+
* transcription direction:
−
** sphingomyelinase
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/3.2.1.26 EC-3.2.1.26]
+
** 25
−
** [http://enzyme.expasy.org/EC/3.2.1.48 EC-3.2.1.48]
+
* centisome position:
 +
** 0.34823793   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[GUANINE-DEAMINASE-RXN]]
−
** 1 [[WATER]][c] '''+''' 1 [[SUCROSE]][c] '''=>''' 1 [[BETA-D-FRUCTOSE]][c] '''+''' 1 [[Glucopyranose]][c]
+
−
* With common name(s):
+
−
** 1 H2O[c] '''+''' 1 sucrose[c] '''=>''' 1 β-D-fructofuranose[c] '''+''' 1 D-glucopyranose[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Tiso_gene_12644]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: ec-number
−
== Pathways  ==
+
** Source: [[orthology-creinhardtii]]
−
* [[PWY-621]], sucrose degradation III (sucrose invertase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-621 PWY-621]
+
* Reaction: [[RXN-15261]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY66-373]], sucrose degradation V (sucrose α-glucosidase): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-373 PWY66-373]
+
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[P164-PWY]]
 +
* [[PWY-6608]]
 +
* [[PWY-7442]]
 +
* [[PWY-5497]]
 +
* [[PWY-6606]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=3075}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33795 33795]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=25}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00802 R00802]
+
{{#set: centisome position=0.34823793    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=GUANINE-DEAMINASE-RXN|RXN-15261}}
−
{{#set: common name=sphingomyelinase}}
+
{{#set: pathway associated=P164-PWY|PWY-6608|PWY-7442|PWY-5497|PWY-6606}}
−
{{#set: ec number=EC-3.2.1.26}}
+
−
{{#set: ec number=EC-3.2.1.48}}
+
−
{{#set: gene associated=Tiso_gene_12644}}
+
−
{{#set: in pathway=PWY-621|PWY66-373}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:02, 21 March 2018

Gene Tiso_gene_12280

  • right end position:
    • 3075
  • transcription direction:
    • POSITIVE
  • left end position:
    • 25
  • centisome position:
    • 0.34823793
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12280&oldid=45391"