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Line 1: |
Line 1: |
− | [[Category:Reaction]] | + | [[Category:Gene]] |
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLMURAMATEDEHYDROG-RXN UDPNACETYLMURAMATEDEHYDROG-RXN] == | + | == Gene Tiso_gene_4156 == |
− | * direction:
| + | |
− | ** LEFT-TO-RIGHT
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− | * common name:
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− | ** ORF
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− | ** related_to_isoamyl_alcohol_oxidase
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− | ** d-lactate_dehydrogenase
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− | ** xylitol_oxidase
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− | ** mitochondrial_l-galactono-_-lactone_dehydrogenase
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− | ** oxidoreductase
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− | * ec number:
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− | ** [http://enzyme.expasy.org/EC/1.3.1.98 EC-1.3.1.98]
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| * Synonym(s): | | * Synonym(s): |
| | | |
− | == Reaction Formula == | + | == Reactions associated == |
− | * With identifiers:
| + | * Reaction: [[ATPASE-RXN]] |
− | ** 1 [[PROTON]][c] '''+''' 1 [[UDP-ACETYL-CARBOXYVINYL-GLUCOSAMINE]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[UDP-N-ACETYLMURAMATE]][c] '''+''' 1 [[NADP]][c]
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− | * With common name(s):
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− | ** 1 H+[c] '''+''' 1 UDP-N-acetyl-α-D-glucosamine-enolpyruvate[c] '''+''' 1 NADPH[c] '''=>''' 1 UDP-N-acetyl-α-D-muramate[c] '''+''' 1 NADP+[c]
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− | | + | |
− | == Genes associated with this reaction ==
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− | Genes have been associated with this reaction based on different elements listed below.
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− | * Gene: [[Tiso_gene_4659]] | + | |
− | ** Source: [[annotation-in-silico_annotation]]
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− | *** Assignment: EC-NUMBER
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− | * Gene: [[Tiso_gene_12058]]
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− | ** Source: [[annotation-in-silico_annotation]]
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− | *** Assignment: EC-NUMBER
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− | * Gene: [[Tiso_gene_5194]]
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− | ** Source: [[annotation-in-silico_annotation]]
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− | *** Assignment: EC-NUMBER
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− | * Gene: [[Tiso_gene_4661]]
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− | ** Source: [[annotation-in-silico_annotation]]
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− | *** Assignment: EC-NUMBER
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− | * Gene: [[Tiso_gene_210]]
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− | ** Source: [[annotation-in-silico_annotation]]
| + | |
− | *** Assignment: EC-NUMBER
| + | |
− | ** Source: [[orthology-esiliculosus]]
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− | * Gene: [[Tiso_gene_6635]]
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− | ** Source: [[annotation-in-silico_annotation]]
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− | *** Assignment: EC-NUMBER
| + | |
− | * Gene: [[Tiso_gene_5195]]
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− | ** Source: [[annotation-in-silico_annotation]]
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− | *** Assignment: EC-NUMBER
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− | * Gene: [[Tiso_gene_2120]]
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− | ** Source: [[annotation-in-silico_annotation]]
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− | *** Assignment: EC-NUMBER
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− | * Gene: [[Tiso_gene_6787]]
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− | ** Source: [[annotation-in-silico_annotation]]
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− | *** Assignment: EC-NUMBER
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− | * Gene: [[Tiso_gene_7079]]
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− | ** Source: [[annotation-in-silico_annotation]]
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− | *** Assignment: EC-NUMBER
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− | * Gene: [[Tiso_gene_14132]]
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− | ** Source: [[annotation-in-silico_annotation]]
| + | |
− | *** Assignment: EC-NUMBER
| + | |
− | * Gene: [[Tiso_gene_2121]]
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− | ** Source: [[annotation-in-silico_annotation]]
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− | *** Assignment: EC-NUMBER
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− | * Gene: [[Tiso_gene_2119]]
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− | ** Source: [[annotation-in-silico_annotation]]
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− | *** Assignment: EC-NUMBER
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− | * Gene: [[Tiso_gene_8778]]
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− | ** Source: [[annotation-in-silico_annotation]]
| + | |
− | *** Assignment: EC-NUMBER
| + | |
− | ** Source: [[orthology-esiliculosus]]
| + | |
− | * Gene: [[Tiso_gene_14187]]
| + | |
− | ** Source: [[annotation-in-silico_annotation]]
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− | *** Assignment: EC-NUMBER
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− | * Gene: [[Tiso_gene_7380]]
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− | ** Source: [[annotation-in-silico_annotation]]
| + | |
− | *** Assignment: EC-NUMBER
| + | |
− | * Gene: [[Tiso_gene_12685]]
| + | |
− | ** Source: [[annotation-in-silico_annotation]]
| + | |
− | *** Assignment: EC-NUMBER
| + | |
− | * Gene: [[Tiso_gene_18014]]
| + | |
− | ** Source: [[orthology-esiliculosus]]
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− | == Pathways ==
| + | |
− | * [[PWY-6386]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6386 PWY-6386]
| + | |
− | ** '''1''' reactions found over '''8''' reactions in the full pathway
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− | * [[PWY-6387]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6387 PWY-6387]
| + | |
− | ** '''1''' reactions found over '''8''' reactions in the full pathway
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− | == Reconstruction information ==
| + | |
− | * Category: [[orthology]]
| + | |
− | ** Source: [[orthology-esiliculosus]]
| + | |
− | *** Tool: [[pantograph]]
| + | |
− | * Category: [[annotation]]
| + | |
| ** Source: [[annotation-in-silico_annotation]] | | ** Source: [[annotation-in-silico_annotation]] |
− | *** Tool: [[pathwaytools]] | + | *** Assignment: ec-number |
| + | == Pathways associated == |
| == External links == | | == External links == |
− | * RHEA:
| + | {{#set: reaction associated=ATPASE-RXN}} |
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12248 12248]
| + | |
− | * LIGAND-RXN:
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− | ** [http://www.genome.jp/dbget-bin/www_bget?R03192 R03192]
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− | * UNIPROT:
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− | ** [http://www.uniprot.org/uniprot/Q9PM01 Q9PM01]
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− | ** [http://www.uniprot.org/uniprot/Q9JV28 Q9JV28]
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− | ** [http://www.uniprot.org/uniprot/P44605 P44605]
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− | ** [http://www.uniprot.org/uniprot/P08373 P08373]
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− | {{#set: direction=LEFT-TO-RIGHT}} | + | |
− | {{#set: common name=ORF}}
| + | |
− | {{#set: common name=related_to_isoamyl_alcohol_oxidase}}
| + | |
− | {{#set: common name=d-lactate_dehydrogenase}}
| + | |
− | {{#set: common name=xylitol_oxidase}}
| + | |
− | {{#set: common name=mitochondrial_l-galactono-_-lactone_dehydrogenase}}
| + | |
− | {{#set: common name=oxidoreductase}}
| + | |
− | {{#set: ec number=EC-1.3.1.98}}
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− | {{#set: gene associated=Tiso_gene_4659|Tiso_gene_12058|Tiso_gene_5194|Tiso_gene_4661|Tiso_gene_210|Tiso_gene_6635|Tiso_gene_5195|Tiso_gene_2120|Tiso_gene_6787|Tiso_gene_7079|Tiso_gene_14132|Tiso_gene_2121|Tiso_gene_2119|Tiso_gene_8778|Tiso_gene_14187|Tiso_gene_7380|Tiso_gene_12685|Tiso_gene_18014}}
| + | |
− | {{#set: in pathway=PWY-6386|PWY-6387}}
| + | |
− | {{#set: reconstruction category=orthology|annotation}}
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− | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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− | {{#set: reconstruction tool=pantograph|pathwaytools}}
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