Difference between revisions of "RXN-14728"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11840 RXN-11840] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_pseudouridinesynthase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14728 RXN-14728] == * direction: ** REVERSIBLE * common name: ** amidase * ec number: ** [http:...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11840 RXN-11840] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14728 RXN-14728] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
** trna_pseudouridinesynthase
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** amidase
** trna_pseudouridine_synthase
+
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/5.4.99.26 EC-5.4.99.26]
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** [http://enzyme.expasy.org/EC/3.5.1.4 EC-3.5.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[tRNA-uridine65]][c] '''=>''' 1 [[tRNA-pseudouridine65]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[ACETAMIDE]][c] '''<=>''' 1 [[ACET]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
** 1 a uridine65 in tRNA[c] '''=>''' 1 a pseudouridine65 in tRNA[c]
+
** 1 H2O[c] '''+''' 1 acetamide[c] '''<=>''' 1 acetate[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* Gene: [[Tiso_gene_11913]]
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* Gene: [[Tiso_gene_13682]]
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_9833]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_4020]]
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** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: AUTOMATED-NAME-MATCH
+
* Gene: [[Tiso_gene_19622]]
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** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: AUTOMATED-NAME-MATCH
+
* Gene: [[Tiso_gene_18959]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: AUTOMATED-NAME-MATCH
+
* Gene: [[Tiso_gene_2988]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: AUTOMATED-NAME-MATCH
+
* Gene: [[Tiso_gene_4021]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
*** Assignment: AUTOMATED-NAME-MATCH
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
* LIGAND-RXN:
{{#set: common name=trna_pseudouridinesynthase}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00321 R00321]
{{#set: common name=trna_pseudouridine_synthase}}
+
{{#set: direction=REVERSIBLE}}
{{#set: ec number=EC-5.4.99.26}}
+
{{#set: common name=amidase}}
{{#set: gene associated=Tiso_gene_11913|Tiso_gene_9833|Tiso_gene_4020|Tiso_gene_19622|Tiso_gene_18959|Tiso_gene_2988|Tiso_gene_4021}}
+
{{#set: ec number=EC-3.5.1.4}}
 +
{{#set: gene associated=Tiso_gene_13682}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 21:03, 21 March 2018

Reaction RXN-14728

  • direction:
    • REVERSIBLE
  • common name:
    • amidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 acetamide[c] <=> 1 acetate[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links