Difference between revisions of "RXN-10655"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** adeno...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10655 RXN-10655] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-(acyl-carrier-pro...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10655 RXN-10655] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** adenosylmethionine-8-amino-7-oxononanoate_aminotransferase
+
** 3-oxoacyl-(acyl-carrier-protein)
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.3.3 EC-6.3.3.3]
+
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DIAMINONONANOATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[DETHIOBIOTIN]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[3-oxo-cis-D7-tetradecenoyl-ACPs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[3-hydroxy-cis-D7-tetraecenoyl-ACPs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 CO2[c] '''+''' 1 7,8-diaminopelargonate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 3 H+[c] '''+''' 1 dethiobiotin[c]
+
** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 a 3-oxo-cis-Δ7-tetradecenoyl-[acp][c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxy cis Δ7-tetradecenoyl-[acp][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_11635]]
+
* Gene: [[Tiso_gene_13083]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_9885]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
+
* [[PWY-6282]], palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6282 PWY-6282]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7380 PWY-7380]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15805 15805]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03182 R03182]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9JV95 Q9JV95]
 
−
** [http://www.uniprot.org/uniprot/Q9PIJ1 Q9PIJ1]
 
−
** [http://www.uniprot.org/uniprot/P46397 P46397]
 
−
** [http://www.uniprot.org/uniprot/P22818 P22818]
 
−
** [http://www.uniprot.org/uniprot/P13000 P13000]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=adenosylmethionine-8-amino-7-oxononanoate_aminotransferase}}
+
{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
−
{{#set: ec number=EC-6.3.3.3}}
+
{{#set: ec number=EC-1.1.1.100}}
−
{{#set: gene associated=Tiso_gene_11635}}
+
{{#set: gene associated=Tiso_gene_13083|Tiso_gene_9885}}
−
{{#set: in pathway=PWY0-1507|PWY-7380}}
+
{{#set: in pathway=PWY-6282}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:03, 21 March 2018

Reaction RXN-10655

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxoacyl-(acyl-carrier-protein)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6282, palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): PWY-6282
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10655&oldid=45618"