Difference between revisions of "RXN-11486"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_16512 == * right end position: ** 4234 * transcription direction: ** POSITIVE * left end position: ** 3082 * centisome position: ** 71.4915...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11486 RXN-11486] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11486 RXN-11486] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * ec number: | |
| − | ** | + | ** [http://enzyme.expasy.org/EC/2.5.1.85 EC-2.5.1.85] |
| − | * | + | |
| − | ** | + | |
| − | + | ||
| − | + | ||
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| − | ** Source: [[ | + | ** 5 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[SOLANESYL-PYROPHOSPHATE]][c] '''+''' 5 [[PPI]][c] |
| − | *** | + | * With common name(s): |
| + | ** 5 isopentenyl diphosphate[c] '''+''' 1 geranylgeranyl diphosphate[c] '''=>''' 1 all-trans-nonaprenyl diphosphate[c] '''+''' 5 diphosphate[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_2848]] | ||
| + | ** Source: [[orthology-synechocystis]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_18201]] | ||
| + | ** Source: [[orthology-synechocystis]] | ||
| + | == Pathways == | ||
| + | * [[PWY-6520]], nonaprenyl diphosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6520 PWY-6520] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-synechocystis]] | ||
| + | *** Tool: [[pantograph]] | ||
** Source: [[orthology-esiliculosus]] | ** Source: [[orthology-esiliculosus]] | ||
| − | * | + | *** Tool: [[pantograph]] |
| − | ** | + | |
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27594 27594] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R09251 R09251] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: ec number=EC-2.5.1.85}} |
| + | {{#set: gene associated=Tiso_gene_2848|Tiso_gene_18201}} | ||
| + | {{#set: in pathway=PWY-6520}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-synechocystis|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 20:07, 21 March 2018
Contents
Reaction RXN-11486
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 5 DELTA3-ISOPENTENYL-PP[c] + 1 GERANYLGERANYL-PP[c] => 1 SOLANESYL-PYROPHOSPHATE[c] + 5 PPI[c]
- With common name(s):
- 5 isopentenyl diphosphate[c] + 1 geranylgeranyl diphosphate[c] => 1 all-trans-nonaprenyl diphosphate[c] + 5 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_2848
- Source: orthology-synechocystis
- Source: orthology-esiliculosus
- Gene: Tiso_gene_18201
- Source: orthology-synechocystis
Pathways
- PWY-6520, nonaprenyl diphosphate biosynthesis II: PWY-6520
- 1 reactions found over 1 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-synechocystis
External links
