Difference between revisions of "R-2-Hydroxyacids"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.224-RXN 2.4.1.224-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** exostosin-1 ** prob...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=R-2-Hydroxyacids R-2-Hydroxyacids] == * common name: ** an (R)-2-hydroxyacid * Synonym(s): ==...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.224-RXN 2.4.1.224-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=R-2-Hydroxyacids R-2-Hydroxyacids] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
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** exostosin-1
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** an (R)-2-hydroxyacid
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** probable_glycosyltransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.1.224 EC-2.4.1.224]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GlcNAc-GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Core]][c] '''+''' 1 [[UDP]][c]
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* [[2-HALOACID-DEHALOGENASE-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 a [protein]-3-O-(β-D-GlcA-(1→3)-α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] '''+''' 1 UDP-N-acetyl-α-D-glucosamine[c] '''=>''' 1 H+[c] '''+''' 1 a [protein]-3-O-(α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] '''+''' 1 UDP[c]
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* [[RXN-6263]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_6495]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_6496]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6558]], heparan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6558 PWY-6558]
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** '''3''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: common name=an (R)-2-hydroxyacid}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07334 R07334]
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{{#set: produced by=2-HALOACID-DEHALOGENASE-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reversible reaction associated=RXN-6263}}
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{{#set: common name=exostosin-1}}
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{{#set: common name=probable_glycosyltransferase}}
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{{#set: ec number=EC-2.4.1.224}}
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{{#set: gene associated=Tiso_gene_6495|Tiso_gene_6496}}
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{{#set: in pathway=PWY-6558}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 21:07, 21 March 2018

Metabolite R-2-Hydroxyacids

  • common name:
    • an (R)-2-hydroxyacid
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=R-2-Hydroxyacids&oldid=46083"